Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.27□□□□□ -1.57
UBA52P62987 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.27□□□□□ -1.57
UBA52P62987 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.27□□□□□ -1.57
UBA52P62987 DNAJA1P5-201ENST00000440278 943 ntBASIC5.27□□□□□ -1.57
UBA52P62987 OR2L9P-201ENST00000444456 913 ntBASIC5.27□□□□□ -1.57
UBA52P62987 AC133965.1-201ENST00000452984 354 ntBASIC5.27□□□□□ -1.57
UBA52P62987 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.27□□□□□ -1.57
UBA52P62987 AC018645.1-201ENST00000505003 109 ntBASIC5.27□□□□□ -1.57
UBA52P62987 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
UBA52P62987 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.27□□□□□ -1.57
UBA52P62987 HMGN1P17-201ENST00000513734 295 ntBASIC5.27□□□□□ -1.57
UBA52P62987 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.27□□□□□ -1.57
UBA52P62987 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.27□□□□□ -1.57
UBA52P62987 OR8Q1P-201ENST00000526467 655 ntBASIC5.27□□□□□ -1.57
UBA52P62987 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
UBA52P62987 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.27□□□□□ -1.57
UBA52P62987 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.27□□□□□ -1.57
UBA52P62987 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC5.27□□□□□ -1.57
UBA52P62987 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.27□□□□□ -1.57
UBA52P62987 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.27□□□□□ -1.57
UBA52P62987 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.27□□□□□ -1.57
UBA52P62987 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.27□□□□□ -1.57
UBA52P62987 AC010503.3-201ENST00000594355 540 ntBASIC5.27□□□□□ -1.57
UBA52P62987 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.27□□□□□ -1.57
UBA52P62987 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.27□□□□□ -1.57
UBA52P62987 AL157762.1-201ENST00000619612 415 ntBASIC5.27□□□□□ -1.57
UBA52P62987 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
UBA52P62987 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.27□□□□□ -1.57
UBA52P62987 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
UBA52P62987 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
UBA52P62987 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.27□□□□□ -1.57
UBA52P62987 AL022311.1-201ENST00000623726 19416 ntBASIC5.27□□□□□ -1.57
UBA52P62987 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UBA52P62987 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
UBA52P62987 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
UBA52P62987 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
UBA52P62987 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
UBA52P62987 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
UBA52P62987 UGT2B24P-201ENST00000514441 1597 ntBASIC5.26□□□□□ -1.57
UBA52P62987 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.26□□□□□ -1.57
UBA52P62987 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
UBA52P62987 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.26□□□□□ -1.57
UBA52P62987 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
UBA52P62987 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
UBA52P62987 RNA5SP478-201ENST00000364657 115 ntBASIC5.26□□□□□ -1.57
UBA52P62987 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.26□□□□□ -1.57
UBA52P62987 U3.43-201ENST00000410734 213 ntBASIC5.26□□□□□ -1.57
UBA52P62987 AL035422.1-201ENST00000414193 397 ntBASIC5.26□□□□□ -1.57
UBA52P62987 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.26□□□□□ -1.57
UBA52P62987 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.26□□□□□ -1.57
UBA52P62987 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
UBA52P62987 OSTCP4-201ENST00000424397 449 ntBASIC5.26□□□□□ -1.57
UBA52P62987 RPS27AP6-201ENST00000427962 448 ntBASIC5.26□□□□□ -1.57
UBA52P62987 RPSAP65-201ENST00000429660 595 ntBASIC5.26□□□□□ -1.57
UBA52P62987 PPIAP20-201ENST00000449839 135 ntBASIC5.26□□□□□ -1.57
UBA52P62987 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.26□□□□□ -1.57
UBA52P62987 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
UBA52P62987 ZNF519P4-201ENST00000514008 125 ntBASIC5.26□□□□□ -1.57
UBA52P62987 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.26□□□□□ -1.57
UBA52P62987 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
UBA52P62987 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.26□□□□□ -1.57
UBA52P62987 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.26□□□□□ -1.57
UBA52P62987 AC093524.1-201ENST00000564266 1094 ntBASIC5.26□□□□□ -1.57
UBA52P62987 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.26□□□□□ -1.57
UBA52P62987 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.26□□□□□ -1.57
UBA52P62987 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.26□□□□□ -1.57
UBA52P62987 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.26□□□□□ -1.57
UBA52P62987 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.26□□□□□ -1.57
UBA52P62987 MIR6729-201ENST00000618194 65 ntBASIC5.26□□□□□ -1.57
UBA52P62987 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.26□□□□□ -1.57
UBA52P62987 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
UBA52P62987 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.26□□□□□ -1.57
UBA52P62987 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
UBA52P62987 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.26□□□□□ -1.57
UBA52P62987 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
UBA52P62987 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
UBA52P62987 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
UBA52P62987 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
UBA52P62987 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC5.25□□□□□ -1.57
UBA52P62987 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.25□□□□□ -1.57
UBA52P62987 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.25□□□□□ -1.57
UBA52P62987 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
UBA52P62987 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
UBA52P62987 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
UBA52P62987 AP005435.3-201ENST00000531260 3198 ntBASIC5.25□□□□□ -1.57
UBA52P62987 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.25□□□□□ -1.57
UBA52P62987 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
UBA52P62987 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
UBA52P62987 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
UBA52P62987 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
UBA52P62987 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
UBA52P62987 RPL21P50-201ENST00000417698 477 ntBASIC5.25□□□□□ -1.57
UBA52P62987 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
UBA52P62987 AC002127.1-201ENST00000421305 225 ntBASIC5.25□□□□□ -1.57
UBA52P62987 AC083862.1-201ENST00000427378 1242 ntBASIC5.25□□□□□ -1.57
UBA52P62987 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.25□□□□□ -1.57
UBA52P62987 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC5.25□□□□□ -1.57
UBA52P62987 RPS29P14-201ENST00000431518 171 ntBASIC5.25□□□□□ -1.57
UBA52P62987 USP24P1-201ENST00000433802 779 ntBASIC5.25□□□□□ -1.57
UBA52P62987 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms