Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SEC61A1P61619 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SEC61A1P61619 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.51□□□□□ -1.53
SEC61A1P61619 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SEC61A1P61619 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.51□□□□□ -1.53
SEC61A1P61619 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SEC61A1P61619 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SEC61A1P61619 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A1P61619 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
SEC61A1P61619 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A1P61619 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A1P61619 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.5□□□□□ -1.53
SEC61A1P61619 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A1P61619 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SEC61A1P61619 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SEC61A1P61619 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A1P61619 Y_RNA.62-201ENST00000362840 99 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.5□□□□□ -1.53
SEC61A1P61619 MIR620-201ENST00000385232 95 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 AL121835.1-201ENST00000404250 354 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 RSL24D1P1-201ENST00000404972 493 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 RN7SKP221-201ENST00000410420 301 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 NME1P1-201ENST00000420914 382 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 AL139184.1-202ENST00000422303 222 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.5□□□□□ -1.53
SEC61A1P61619 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.5□□□□□ -1.53
SEC61A1P61619 MRPS21P2-201ENST00000424704 264 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.5□□□□□ -1.53
SEC61A1P61619 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A1P61619 RPSAP32-201ENST00000432681 526 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 AC074367.1-201ENST00000438685 1125 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 ARMC4P1-201ENST00000438905 707 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.5□□□□□ -1.53
SEC61A1P61619 RPL5P10-201ENST00000445207 894 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.5□□□□□ -1.53
SEC61A1P61619 RARRES2P3-201ENST00000457739 473 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 AC119751.4-201ENST00000507498 357 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 RN7SKP183-201ENST00000517169 324 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 KCTD9P6-201ENST00000522306 950 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.5□□□□□ -1.53
SEC61A1P61619 MTND5P21-201ENST00000531961 522 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.5□□□□□ -1.53
SEC61A1P61619 AC012414.2-201ENST00000559474 187 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
SEC61A1P61619 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A1P61619 AC233702.7-202ENST00000582941 211 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 OR1AB1P-201ENST00000585564 761 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.5□□□□□ -1.53
SEC61A1P61619 AC011500.1-201ENST00000601963 469 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 AC040174.2-201ENST00000602701 465 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 AL157899.1-201ENST00000604110 936 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.5□□□□□ -1.53
SEC61A1P61619 AC009779.8-202ENST00000607990 932 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 AC005899.7-201ENST00000618199 588 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 AC022960.3-201ENST00000619794 441 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.5□□□□□ -1.53
SEC61A1P61619 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.5□□□□□ -1.53
SEC61A1P61619 AC009269.6-201ENST00000621778 588 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 AC018692.2-201ENST00000624130 348 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SEC61A1P61619 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A1P61619 AL513548.1-201ENST00000562904 1724 ntBASIC5.5□□□□□ -1.53
SEC61A1P61619 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A1P61619 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.5□□□□□ -1.53
SEC61A1P61619 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.5□□□□□ -1.53
SEC61A1P61619 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.5□□□□□ -1.53
SEC61A1P61619 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A1P61619 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
SEC61A1P61619 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SEC61A1P61619 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.5□□□□□ -1.53
SEC61A1P61619 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.5□□□□□ -1.53
SEC61A1P61619 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.5□□□□□ -1.53
SEC61A1P61619 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A1P61619 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A1P61619 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.5□□□□□ -1.53
SEC61A1P61619 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A1P61619 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SEC61A1P61619 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SEC61A1P61619 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SEC61A1P61619 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.49□□□□□ -1.53
SEC61A1P61619 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.49□□□□□ -1.53
SEC61A1P61619 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
SEC61A1P61619 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SEC61A1P61619 AC090181.3-201ENST00000624777 1514 ntBASIC5.49□□□□□ -1.53
SEC61A1P61619 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.49□□□□□ -1.53
SEC61A1P61619 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.49□□□□□ -1.53
SEC61A1P61619 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.49□□□□□ -1.53
SEC61A1P61619 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.49□□□□□ -1.53
SEC61A1P61619 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SEC61A1P61619 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SEC61A1P61619 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SEC61A1P61619 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SEC61A1P61619 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SEC61A1P61619 RN7SKP250-201ENST00000363924 321 ntBASIC5.49□□□□□ -1.53
SEC61A1P61619 RN7SKP129-201ENST00000410288 299 ntBASIC5.49□□□□□ -1.53
SEC61A1P61619 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.49□□□□□ -1.53
SEC61A1P61619 MTCO1P57-201ENST00000432182 261 ntBASIC5.49□□□□□ -1.53
SEC61A1P61619 AL645939.3-201ENST00000435408 225 ntBASIC5.49□□□□□ -1.53
SEC61A1P61619 CLNS1AP1-201ENST00000435954 682 ntBASIC5.49□□□□□ -1.53
SEC61A1P61619 AL353718.1-201ENST00000451028 517 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms