Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.08□□□□□ -1.6
AP3S2P59780 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC5.08□□□□□ -1.6
AP3S2P59780 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.08□□□□□ -1.6
AP3S2P59780 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC5.08□□□□□ -1.6
AP3S2P59780 OR4A42P-201ENST00000531397 938 ntBASIC5.08□□□□□ -1.6
AP3S2P59780 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.08□□□□□ -1.6
AP3S2P59780 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
AP3S2P59780 AL359219.2-201ENST00000555184 348 ntBASIC5.08□□□□□ -1.6
AP3S2P59780 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
AP3S2P59780 MIR5705-201ENST00000579870 89 ntBASIC5.08□□□□□ -1.6
AP3S2P59780 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AP3S2P59780 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.08□□□□□ -1.6
AP3S2P59780 AL162574.1-201ENST00000615702 950 ntBASIC5.08□□□□□ -1.6
AP3S2P59780 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
AP3S2P59780 AL445670.1-201ENST00000618889 801 ntBASIC5.08□□□□□ -1.6
AP3S2P59780 AC015660.5-201ENST00000623238 564 ntBASIC5.08□□□□□ -1.6
AP3S2P59780 AC124944.3-204ENST00000641191 150 ntBASIC5.08□□□□□ -1.6
AP3S2P59780 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
AP3S2P59780 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AP3S2P59780 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
AP3S2P59780 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
AP3S2P59780 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AP3S2P59780 MAPK10-328ENST00000641553 4009 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 EEF1A1P16-201ENST00000325349 1414 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 AC010132.4-201ENST00000569883 1368 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP3S2P59780 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP3S2P59780 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.07□□□□□ -1.6
AP3S2P59780 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
AP3S2P59780 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AP3S2P59780 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AP3S2P59780 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.07□□□□□ -1.6
AP3S2P59780 AL603750.1-201ENST00000624216 1717 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP3S2P59780 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP3S2P59780 OR10R3P-201ENST00000361688 942 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 RNU1-146P-201ENST00000364015 165 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 RNU105B-201ENST00000364478 208 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
AP3S2P59780 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP3S2P59780 MIR187-201ENST00000385062 109 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 AC019178.1-201ENST00000392337 440 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC5.07□□□□□ -1.6
AP3S2P59780 RNA5SP431-201ENST00000410312 120 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 RN7SKP121-201ENST00000410842 305 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 SETP10-201ENST00000424368 814 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC5.07□□□□□ -1.6
AP3S2P59780 AC092066.1-201ENST00000425131 317 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.07□□□□□ -1.6
AP3S2P59780 VN1R53P-201ENST00000429536 957 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.07□□□□□ -1.6
AP3S2P59780 AC108479.1-201ENST00000431142 427 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 EMC3-AS1-205ENST00000438698 534 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 AL359265.1-201ENST00000440296 795 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.07□□□□□ -1.6
AP3S2P59780 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.07□□□□□ -1.6
AP3S2P59780 RPS10P18-201ENST00000442662 495 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 RPS23P9-201ENST00000448848 438 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 ST13P21-201ENST00000453250 1098 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.07□□□□□ -1.6
AP3S2P59780 RNU1-88P-201ENST00000459274 128 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 RN7SL263P-201ENST00000467969 290 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 RPL10P7-201ENST00000495649 625 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC5.07□□□□□ -1.6
AP3S2P59780 AC093870.1-201ENST00000506837 213 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.07□□□□□ -1.6
AP3S2P59780 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.07□□□□□ -1.6
AP3S2P59780 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC5.07□□□□□ -1.6
AP3S2P59780 OR56A7P-201ENST00000524865 941 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.07□□□□□ -1.6
AP3S2P59780 AC005519.1-201ENST00000554490 601 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.07□□□□□ -1.6
AP3S2P59780 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC5.07□□□□□ -1.6
AP3S2P59780 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC5.07□□□□□ -1.6
AP3S2P59780 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.07□□□□□ -1.6
AP3S2P59780 HIRAP1-201ENST00000605318 787 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 AC010320.5-201ENST00000619124 676 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 AC005514.1-201ENST00000623521 208 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AP3S2P59780 HSPD1P7-201ENST00000447985 1686 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.07□□□□□ -1.6
AP3S2P59780 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AP3S2P59780 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AP3S2P59780 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP3S2P59780 AC007938.2-201ENST00000604666 2634 ntBASIC5.07□□□□□ -1.6
AP3S2P59780 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
AP3S2P59780 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AP3S2P59780 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.06□□□□□ -1.6
AP3S2P59780 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.06□□□□□ -1.6
AP3S2P59780 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP3S2P59780 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
AP3S2P59780 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP3S2P59780 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.06□□□□□ -1.6
AP3S2P59780 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AP3S2P59780 TUBBP10-201ENST00000427668 1301 ntBASIC5.06□□□□□ -1.6
AP3S2P59780 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP3S2P59780 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms