Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RPL6P9-201ENST00000466502 859 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 RN7SL561P-201ENST00000488553 281 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.99□□□□□ -1.45
CLRN1P58418 AC063943.2-201ENST00000495697 534 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 RBMS2P1-201ENST00000525031 1226 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 SNRPCP6-201ENST00000528310 210 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 AP002004.1-206ENST00000532441 876 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 BTG1P1-201ENST00000540396 508 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 MTND4P33-201ENST00000556706 766 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 AC007346.2-201ENST00000564816 892 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.99□□□□□ -1.45
CLRN1P58418 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.99□□□□□ -1.45
CLRN1P58418 RN7SL426P-201ENST00000579106 295 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 RN7SL657P-201ENST00000582431 293 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.99□□□□□ -1.45
CLRN1P58418 AC110760.3-201ENST00000598794 467 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 AC015726.1-201ENST00000602353 681 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 AC079610.2-201ENST00000604818 690 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 AC012557.2-201ENST00000605919 418 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.99□□□□□ -1.45
CLRN1P58418 AP002345.2-201ENST00000609961 904 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 AC013470.4-201ENST00000619978 986 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 AC106782.7-201ENST00000624024 418 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 AC133555.5-201ENST00000624430 418 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 AC005858.3-201ENST00000624756 589 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC5.99□□□□□ -1.45
CLRN1P58418 SNORA16A-202ENST00000628458 135 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 AC090897.3-201ENST00000636973 1157 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
CLRN1P58418 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLRN1P58418 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLRN1P58418 ZNF101P1-201ENST00000435701 1720 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLRN1P58418 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CLRN1P58418 AC120338.1-201ENST00000625074 1541 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLRN1P58418 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLRN1P58418 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLRN1P58418 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLRN1P58418 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CLRN1P58418 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC5.99□□□□□ -1.45
CLRN1P58418 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CLRN1P58418 AC068733.2-201ENST00000605434 1418 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
CLRN1P58418 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLRN1P58418 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CLRN1P58418 MAK-202ENST00000354489 3941 ntTSL 5 BASIC5.98□□□□□ -1.45
CLRN1P58418 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLRN1P58418 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLRN1P58418 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLRN1P58418 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.98□□□□□ -1.45
CLRN1P58418 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLRN1P58418 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLRN1P58418 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.98□□□□□ -1.45
CLRN1P58418 CREM-216ENST00000429130 1476 ntTSL 5 BASIC5.98□□□□□ -1.45
CLRN1P58418 CYP2G2P-201ENST00000594920 1485 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CLRN1P58418 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLRN1P58418 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
CLRN1P58418 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
CLRN1P58418 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLRN1P58418 RNU4-68P-201ENST00000364314 141 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 SNORA70.3-201ENST00000365075 132 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.98□□□□□ -1.45
CLRN1P58418 EEF1GP6-201ENST00000402309 905 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 AL049697.3-201ENST00000406493 982 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 AL451061.1-201ENST00000407887 862 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.98□□□□□ -1.45
CLRN1P58418 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC5.98□□□□□ -1.45
CLRN1P58418 AC009518.2-201ENST00000418056 731 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.98□□□□□ -1.45
CLRN1P58418 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLRN1P58418 RPS7P12-201ENST00000422385 582 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 BX119904.4-201ENST00000424402 301 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLRN1P58418 EIF4A1P5-201ENST00000428062 1095 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 VN1R108P-201ENST00000431580 830 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.98□□□□□ -1.45
CLRN1P58418 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.98□□□□□ -1.45
CLRN1P58418 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CLRN1P58418 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLRN1P58418 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLRN1P58418 AL158214.1-201ENST00000444423 404 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 PFN1P11-201ENST00000445829 389 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLRN1P58418 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.98□□□□□ -1.45
CLRN1P58418 AL096803.2-201ENST00000450032 677 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.98□□□□□ -1.45
CLRN1P58418 AC010468.1-201ENST00000461022 817 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 PRDX3P4-201ENST00000470828 747 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 RPS4XP6-201ENST00000477670 797 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 RPL7AP23-201ENST00000482625 776 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 RPS27AP16-201ENST00000492222 470 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 AC026414.1-201ENST00000504046 698 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.98□□□□□ -1.45
CLRN1P58418 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC5.98□□□□□ -1.45
CLRN1P58418 RNA5SP75-201ENST00000516841 111 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 RNU6-1028P-201ENST00000517164 93 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 AC079064.1-201ENST00000528365 362 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 AL121839.1-201ENST00000556233 1185 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms