Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CLDN6P56747 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.85□□□□□ -1.47
CLDN6P56747 AC109780.1-201ENST00000451768 1344 ntBASIC5.85□□□□□ -1.47
CLDN6P56747 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN6P56747 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN6P56747 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN6P56747 RNA5SP514-201ENST00000363717 111 ntBASIC5.85□□□□□ -1.47
CLDN6P56747 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN6P56747 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
CLDN6P56747 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.85□□□□□ -1.47
CLDN6P56747 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.85□□□□□ -1.47
CLDN6P56747 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.85□□□□□ -1.47
CLDN6P56747 AC093155.2-201ENST00000420734 937 ntBASIC5.85□□□□□ -1.47
CLDN6P56747 CYCSP52-201ENST00000422857 310 ntBASIC5.85□□□□□ -1.47
CLDN6P56747 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN6P56747 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.85□□□□□ -1.47
CLDN6P56747 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN6P56747 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.85□□□□□ -1.47
CLDN6P56747 AL451136.1-201ENST00000435399 325 ntBASIC5.85□□□□□ -1.47
CLDN6P56747 AC010343.2-201ENST00000510162 224 ntBASIC5.85□□□□□ -1.47
CLDN6P56747 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN6P56747 CYCSP22-201ENST00000517555 339 ntBASIC5.85□□□□□ -1.47
CLDN6P56747 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.85□□□□□ -1.47
CLDN6P56747 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN6P56747 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN6P56747 AC006530.1-201ENST00000555980 571 ntBASIC5.85□□□□□ -1.47
CLDN6P56747 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.85□□□□□ -1.47
CLDN6P56747 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.85□□□□□ -1.47
CLDN6P56747 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.85□□□□□ -1.47
CLDN6P56747 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN6P56747 AC016542.2-201ENST00000624201 619 ntBASIC5.85□□□□□ -1.47
CLDN6P56747 AL357562.1-201ENST00000624911 609 ntBASIC5.85□□□□□ -1.47
CLDN6P56747 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN6P56747 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN6P56747 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN6P56747 C4BPAP1-201ENST00000415474 1893 ntBASIC5.85□□□□□ -1.47
CLDN6P56747 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN6P56747 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN6P56747 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN6P56747 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN6P56747 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN6P56747 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN6P56747 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CLDN6P56747 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CLDN6P56747 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN6P56747 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN6P56747 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN6P56747 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN6P56747 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CLDN6P56747 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.84□□□□□ -1.47
CLDN6P56747 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CLDN6P56747 AC011815.2-201ENST00000618230 2021 ntBASIC5.84□□□□□ -1.47
CLDN6P56747 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN6P56747 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.84□□□□□ -1.47
CLDN6P56747 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.84□□□□□ -1.47
CLDN6P56747 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN6P56747 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.84□□□□□ -1.47
CLDN6P56747 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
CLDN6P56747 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN6P56747 AC027088.4-201ENST00000611559 1947 ntBASIC5.84□□□□□ -1.47
CLDN6P56747 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN6P56747 AC074141.1-201ENST00000588129 2995 ntBASIC5.84□□□□□ -1.47
CLDN6P56747 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN6P56747 RNA5SP500-201ENST00000364486 119 ntBASIC5.84□□□□□ -1.47
CLDN6P56747 RPS3AP2-201ENST00000407190 754 ntBASIC5.84□□□□□ -1.47
CLDN6P56747 RPL35AP3-201ENST00000414680 288 ntBASIC5.84□□□□□ -1.47
CLDN6P56747 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.84□□□□□ -1.47
CLDN6P56747 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.84□□□□□ -1.47
CLDN6P56747 AC092967.1-201ENST00000449016 481 ntBASIC5.84□□□□□ -1.47
CLDN6P56747 OR5M14P-201ENST00000506803 618 ntBASIC5.84□□□□□ -1.47
CLDN6P56747 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.84□□□□□ -1.47
CLDN6P56747 SNORA70.20-201ENST00000516848 126 ntBASIC5.84□□□□□ -1.47
CLDN6P56747 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.84□□□□□ -1.47
CLDN6P56747 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.84□□□□□ -1.47
CLDN6P56747 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.84□□□□□ -1.47
CLDN6P56747 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.84□□□□□ -1.47
CLDN6P56747 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.84□□□□□ -1.47
CLDN6P56747 AC009120.3-201ENST00000563335 499 ntBASIC5.84□□□□□ -1.47
CLDN6P56747 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.84□□□□□ -1.47
CLDN6P56747 FAM27E4-201ENST00000605259 342 ntBASIC5.84□□□□□ -1.47
CLDN6P56747 AL136295.6-201ENST00000610486 658 ntBASIC5.84□□□□□ -1.47
CLDN6P56747 MIR6798-201ENST00000612887 67 ntBASIC5.84□□□□□ -1.47
CLDN6P56747 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN6P56747 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.84□□□□□ -1.47
CLDN6P56747 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CLDN6P56747 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
CLDN6P56747 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CLDN6P56747 AC093829.1-201ENST00000506662 1618 ntBASIC5.84□□□□□ -1.47
CLDN6P56747 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CLDN6P56747 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CLDN6P56747 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CLDN6P56747 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
CLDN6P56747 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CLDN6P56747 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.83□□□□□ -1.48
CLDN6P56747 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN6P56747 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN6P56747 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.83□□□□□ -1.48
CLDN6P56747 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN6P56747 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CLDN6P56747 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms