Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 ZNF619P1-201ENST00000446539 752 ntBASIC5.81□□□□□ -1.48
PKNOX1P55347 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PKNOX1P55347 RSU1P1-201ENST00000453416 441 ntBASIC5.81□□□□□ -1.48
PKNOX1P55347 RPS7P10-201ENST00000464254 603 ntBASIC5.81□□□□□ -1.48
PKNOX1P55347 H3F3AP5-201ENST00000475267 429 ntBASIC5.81□□□□□ -1.48
PKNOX1P55347 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.81□□□□□ -1.48
PKNOX1P55347 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PKNOX1P55347 AC138517.1-201ENST00000515724 568 ntBASIC5.81□□□□□ -1.48
PKNOX1P55347 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.81□□□□□ -1.48
PKNOX1P55347 OR4A42P-201ENST00000531397 938 ntBASIC5.81□□□□□ -1.48
PKNOX1P55347 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.81□□□□□ -1.48
PKNOX1P55347 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.81□□□□□ -1.48
PKNOX1P55347 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.81□□□□□ -1.48
PKNOX1P55347 HMGN1P26-201ENST00000558737 303 ntBASIC5.81□□□□□ -1.48
PKNOX1P55347 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.81□□□□□ -1.48
PKNOX1P55347 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.81□□□□□ -1.48
PKNOX1P55347 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.81□□□□□ -1.48
PKNOX1P55347 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.81□□□□□ -1.48
PKNOX1P55347 uc_338.26-201ENST00000612659 160 ntBASIC5.81□□□□□ -1.48
PKNOX1P55347 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.81□□□□□ -1.48
PKNOX1P55347 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.81□□□□□ -1.48
PKNOX1P55347 AL158152.1-201ENST00000602652 1435 ntBASIC5.81□□□□□ -1.48
PKNOX1P55347 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PKNOX1P55347 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PKNOX1P55347 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PKNOX1P55347 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PKNOX1P55347 AC114774.1-201ENST00000507410 1770 ntBASIC5.8□□□□□ -1.48
PKNOX1P55347 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.8□□□□□ -1.48
PKNOX1P55347 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PKNOX1P55347 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
PKNOX1P55347 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PKNOX1P55347 AC011933.2-201ENST00000578539 2790 ntBASIC5.8□□□□□ -1.48
PKNOX1P55347 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PKNOX1P55347 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PKNOX1P55347 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PKNOX1P55347 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.8□□□□□ -1.48
PKNOX1P55347 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PKNOX1P55347 AC139426.3-201ENST00000605648 2059 ntBASIC5.8□□□□□ -1.48
PKNOX1P55347 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.8□□□□□ -1.48
PKNOX1P55347 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PKNOX1P55347 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PKNOX1P55347 VN1R20P-201ENST00000425215 966 ntBASIC5.8□□□□□ -1.48
PKNOX1P55347 AC130360.1-201ENST00000425489 1117 ntBASIC5.8□□□□□ -1.48
PKNOX1P55347 RPL5P2-201ENST00000429598 854 ntBASIC5.8□□□□□ -1.48
PKNOX1P55347 AC010086.1-201ENST00000437359 1052 ntBASIC5.8□□□□□ -1.48
PKNOX1P55347 AC096632.2-201ENST00000438139 1239 ntBASIC5.8□□□□□ -1.48
PKNOX1P55347 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.8□□□□□ -1.48
PKNOX1P55347 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.8□□□□□ -1.48
PKNOX1P55347 AC097359.1-201ENST00000447946 463 ntBASIC5.8□□□□□ -1.48
PKNOX1P55347 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PKNOX1P55347 AC104164.1-201ENST00000460282 590 ntBASIC5.8□□□□□ -1.48
PKNOX1P55347 AL603882.1-201ENST00000463059 681 ntBASIC5.8□□□□□ -1.48
PKNOX1P55347 OR7E22P-201ENST00000478335 1035 ntBASIC5.8□□□□□ -1.48
PKNOX1P55347 RPL12P30-201ENST00000488389 499 ntBASIC5.8□□□□□ -1.48
PKNOX1P55347 ZNF519P4-201ENST00000514008 125 ntBASIC5.8□□□□□ -1.48
PKNOX1P55347 AC113191.1-201ENST00000517759 403 ntBASIC5.8□□□□□ -1.48
PKNOX1P55347 OR7E158P-201ENST00000524483 910 ntBASIC5.8□□□□□ -1.48
PKNOX1P55347 AC130365.2-201ENST00000525882 1201 ntBASIC5.8□□□□□ -1.48
PKNOX1P55347 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.8□□□□□ -1.48
PKNOX1P55347 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.8□□□□□ -1.48
PKNOX1P55347 AP000619.2-201ENST00000546014 969 ntBASIC5.8□□□□□ -1.48
PKNOX1P55347 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.8□□□□□ -1.48
PKNOX1P55347 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.8□□□□□ -1.48
PKNOX1P55347 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.8□□□□□ -1.48
PKNOX1P55347 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.8□□□□□ -1.48
PKNOX1P55347 AC023389.2-201ENST00000580031 955 ntBASIC5.8□□□□□ -1.48
PKNOX1P55347 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.8□□□□□ -1.48
PKNOX1P55347 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.8□□□□□ -1.48
PKNOX1P55347 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.8□□□□□ -1.48
PKNOX1P55347 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PKNOX1P55347 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PKNOX1P55347 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PKNOX1P55347 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PKNOX1P55347 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PKNOX1P55347 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PKNOX1P55347 PPBPP2-201ENST00000513150 1362 ntBASIC5.8□□□□□ -1.48
PKNOX1P55347 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.8□□□□□ -1.48
PKNOX1P55347 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
PKNOX1P55347 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.79□□□□□ -1.48
PKNOX1P55347 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PKNOX1P55347 AC119674.1-202ENST00000641333 1860 ntBASIC5.79□□□□□ -1.48
PKNOX1P55347 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.79□□□□□ -1.48
PKNOX1P55347 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PKNOX1P55347 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PKNOX1P55347 AL355488.2-201ENST00000609909 2850 ntBASIC5.79□□□□□ -1.48
PKNOX1P55347 AC006600.2-201ENST00000624834 2506 ntBASIC5.79□□□□□ -1.48
PKNOX1P55347 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.79□□□□□ -1.48
PKNOX1P55347 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PKNOX1P55347 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.79□□□□□ -1.48
PKNOX1P55347 MIR551B-201ENST00000384984 96 ntBASIC5.79□□□□□ -1.48
PKNOX1P55347 AL132875.1-201ENST00000403623 949 ntBASIC5.79□□□□□ -1.48
PKNOX1P55347 AC099677.3-201ENST00000427081 395 ntBASIC5.79□□□□□ -1.48
PKNOX1P55347 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PKNOX1P55347 AC099670.1-201ENST00000455141 783 ntBASIC5.79□□□□□ -1.48
PKNOX1P55347 PFN1P6-201ENST00000476786 399 ntBASIC5.79□□□□□ -1.48
PKNOX1P55347 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.79□□□□□ -1.48
PKNOX1P55347 HMGN1P16-201ENST00000508308 283 ntBASIC5.79□□□□□ -1.48
PKNOX1P55347 CR383658.1-201ENST00000514609 734 ntBASIC5.79□□□□□ -1.48
PKNOX1P55347 AC097486.1-201ENST00000515331 210 ntBASIC5.79□□□□□ -1.48
PKNOX1P55347 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms