Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH11P55287 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH11P55287 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH11P55287 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH11P55287 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.63□□□□□ -1.51
CDH11P55287 AC090286.3-201ENST00000573133 187 ntBASIC5.63□□□□□ -1.51
CDH11P55287 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH11P55287 AC087468.1-201ENST00000604365 630 ntBASIC5.63□□□□□ -1.51
CDH11P55287 AC092944.2-201ENST00000605443 889 ntBASIC5.63□□□□□ -1.51
CDH11P55287 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH11P55287 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH11P55287 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.63□□□□□ -1.51
CDH11P55287 AL353684.1-201ENST00000622677 1120 ntBASIC5.63□□□□□ -1.51
CDH11P55287 MTCO1P1-201ENST00000624263 1081 ntBASIC5.63□□□□□ -1.51
CDH11P55287 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH11P55287 AP001052.1-201ENST00000626421 99 ntBASIC5.63□□□□□ -1.51
CDH11P55287 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH11P55287 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH11P55287 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH11P55287 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH11P55287 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH11P55287 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH11P55287 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH11P55287 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH11P55287 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH11P55287 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH11P55287 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH11P55287 RPL31P11-201ENST00000426558 1558 ntBASIC5.63□□□□□ -1.51
CDH11P55287 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH11P55287 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH11P55287 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH11P55287 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH11P55287 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH11P55287 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
CDH11P55287 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH11P55287 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH11P55287 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH11P55287 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH11P55287 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH11P55287 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CDH11P55287 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH11P55287 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH11P55287 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH11P55287 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH11P55287 SNORD35A-201ENST00000363389 86 ntBASIC5.62□□□□□ -1.51
CDH11P55287 RBBP4P5-201ENST00000398583 1266 ntBASIC5.62□□□□□ -1.51
CDH11P55287 MTND3P20-201ENST00000407663 186 ntBASIC5.62□□□□□ -1.51
CDH11P55287 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH11P55287 AC083862.1-201ENST00000427378 1242 ntBASIC5.62□□□□□ -1.51
CDH11P55287 NPM1P25-201ENST00000429734 854 ntBASIC5.62□□□□□ -1.51
CDH11P55287 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.62□□□□□ -1.51
CDH11P55287 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH11P55287 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH11P55287 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH11P55287 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH11P55287 RANP2-201ENST00000456833 229 ntBASIC5.62□□□□□ -1.51
CDH11P55287 OR52A4P-202ENST00000481634 799 ntBASIC5.62□□□□□ -1.51
CDH11P55287 RN7SL362P-201ENST00000494228 267 ntBASIC5.62□□□□□ -1.51
CDH11P55287 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH11P55287 AC018645.1-201ENST00000505003 109 ntBASIC5.62□□□□□ -1.51
CDH11P55287 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH11P55287 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.62□□□□□ -1.51
CDH11P55287 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH11P55287 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH11P55287 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH11P55287 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH11P55287 AL078601.3-201ENST00000573303 535 ntBASIC5.62□□□□□ -1.51
CDH11P55287 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH11P55287 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH11P55287 MIR132-201ENST00000591554 101 ntBASIC5.62□□□□□ -1.51
CDH11P55287 MIR6071-201ENST00000616741 78 ntBASIC5.62□□□□□ -1.51
CDH11P55287 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH11P55287 AC111152.1-202ENST00000635848 339 ntBASIC5.62□□□□□ -1.51
CDH11P55287 LINC02495-203ENST00000636704 242 ntBASIC5.62□□□□□ -1.51
CDH11P55287 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH11P55287 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH11P55287 MSL3P1-202ENST00000440028 1468 ntBASIC5.62□□□□□ -1.51
CDH11P55287 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH11P55287 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH11P55287 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH11P55287 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH11P55287 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH11P55287 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH11P55287 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH11P55287 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CDH11P55287 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH11P55287 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH11P55287 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH11P55287 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH11P55287 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH11P55287 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH11P55287 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CDH11P55287 RNU4-23P-201ENST00000362839 140 ntBASIC5.61□□□□□ -1.51
CDH11P55287 SNORD1C-201ENST00000363315 78 ntBASIC5.61□□□□□ -1.51
CDH11P55287 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CDH11P55287 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH11P55287 MIR188-201ENST00000385034 86 ntBASIC5.61□□□□□ -1.51
CDH11P55287 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH11P55287 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH11P55287 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms