Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RPS7P11-201ENST00000484240 586 ntBASIC5.75□□□□□ -1.49
GTF2A1P52655 RN7SL445P-201ENST00000495609 293 ntBASIC5.75□□□□□ -1.49
GTF2A1P52655 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.75□□□□□ -1.49
GTF2A1P52655 OR52H2P-201ENST00000514607 902 ntBASIC5.75□□□□□ -1.49
GTF2A1P52655 RNA5SP464-201ENST00000516251 108 ntBASIC5.75□□□□□ -1.49
GTF2A1P52655 RNA5SP360-201ENST00000516555 118 ntBASIC5.75□□□□□ -1.49
GTF2A1P52655 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.75□□□□□ -1.49
GTF2A1P52655 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.75□□□□□ -1.49
GTF2A1P52655 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.75□□□□□ -1.49
GTF2A1P52655 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
GTF2A1P52655 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC5.75□□□□□ -1.49
GTF2A1P52655 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC5.75□□□□□ -1.49
GTF2A1P52655 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
GTF2A1P52655 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.75□□□□□ -1.49
GTF2A1P52655 RPL7AP69-201ENST00000595306 806 ntBASIC5.75□□□□□ -1.49
GTF2A1P52655 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.75□□□□□ -1.49
GTF2A1P52655 AC233280.2-201ENST00000603917 1070 ntBASIC5.75□□□□□ -1.49
GTF2A1P52655 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.75□□□□□ -1.49
GTF2A1P52655 AL353600.1-201ENST00000608148 251 ntBASIC5.75□□□□□ -1.49
GTF2A1P52655 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.75□□□□□ -1.49
GTF2A1P52655 pRNA.9-201ENST00000618609 89 ntBASIC5.75□□□□□ -1.49
GTF2A1P52655 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.75□□□□□ -1.49
GTF2A1P52655 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
GTF2A1P52655 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GTF2A1P52655 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GTF2A1P52655 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GTF2A1P52655 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
GTF2A1P52655 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GTF2A1P52655 OR51H2P-202ENST00000641424 3046 ntBASIC5.74□□□□□ -1.49
GTF2A1P52655 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GTF2A1P52655 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.74□□□□□ -1.49
GTF2A1P52655 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.74□□□□□ -1.49
GTF2A1P52655 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GTF2A1P52655 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
GTF2A1P52655 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GTF2A1P52655 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GTF2A1P52655 RNU12-2P-201ENST00000364789 156 ntBASIC5.74□□□□□ -1.49
GTF2A1P52655 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.74□□□□□ -1.49
GTF2A1P52655 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
GTF2A1P52655 PDCL3P5-201ENST00000398028 722 ntBASIC5.74□□□□□ -1.49
GTF2A1P52655 SNORA77.2-201ENST00000408571 112 ntBASIC5.74□□□□□ -1.49
GTF2A1P52655 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.74□□□□□ -1.49
GTF2A1P52655 RN7SKP268-201ENST00000411107 316 ntBASIC5.74□□□□□ -1.49
GTF2A1P52655 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.74□□□□□ -1.49
GTF2A1P52655 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC5.74□□□□□ -1.49
GTF2A1P52655 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.74□□□□□ -1.49
GTF2A1P52655 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.74□□□□□ -1.49
GTF2A1P52655 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.74□□□□□ -1.49
GTF2A1P52655 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.74□□□□□ -1.49
GTF2A1P52655 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC5.74□□□□□ -1.49
GTF2A1P52655 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.74□□□□□ -1.49
GTF2A1P52655 EIF5AP4-201ENST00000441206 465 ntBASIC5.74□□□□□ -1.49
GTF2A1P52655 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC5.74□□□□□ -1.49
GTF2A1P52655 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC5.74□□□□□ -1.49
GTF2A1P52655 AC002553.2-201ENST00000453217 340 ntBASIC5.74□□□□□ -1.49
GTF2A1P52655 RPL26P30-201ENST00000453533 435 ntBASIC5.74□□□□□ -1.49
GTF2A1P52655 RPS12P20-201ENST00000464109 380 ntBASIC5.74□□□□□ -1.49
GTF2A1P52655 AC021660.1-201ENST00000465006 554 ntBASIC5.74□□□□□ -1.49
GTF2A1P52655 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.74□□□□□ -1.49
GTF2A1P52655 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.74□□□□□ -1.49
GTF2A1P52655 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.74□□□□□ -1.49
GTF2A1P52655 OR4C1P-201ENST00000530880 937 ntBASIC5.74□□□□□ -1.49
GTF2A1P52655 AC022882.1-201ENST00000532142 501 ntBASIC5.74□□□□□ -1.49
GTF2A1P52655 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.74□□□□□ -1.49
GTF2A1P52655 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.74□□□□□ -1.49
GTF2A1P52655 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.74□□□□□ -1.49
GTF2A1P52655 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.74□□□□□ -1.49
GTF2A1P52655 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC5.74□□□□□ -1.49
GTF2A1P52655 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.74□□□□□ -1.49
GTF2A1P52655 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.74□□□□□ -1.49
GTF2A1P52655 AC024614.1-201ENST00000577546 307 ntBASIC5.74□□□□□ -1.49
GTF2A1P52655 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.74□□□□□ -1.49
GTF2A1P52655 NPIPB1P-202ENST00000588786 828 ntBASIC5.74□□□□□ -1.49
GTF2A1P52655 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GTF2A1P52655 AC015871.5-202ENST00000623252 701 ntBASIC5.74□□□□□ -1.49
GTF2A1P52655 AC099654.15-201ENST00000639802 509 ntBASIC5.74□□□□□ -1.49
GTF2A1P52655 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
GTF2A1P52655 AL596275.2-207ENST00000641188 675 ntBASIC5.74□□□□□ -1.49
GTF2A1P52655 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
GTF2A1P52655 AL596275.2-204ENST00000641628 552 ntBASIC5.74□□□□□ -1.49
GTF2A1P52655 AL596275.2-206ENST00000641957 626 ntBASIC5.74□□□□□ -1.49
GTF2A1P52655 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.74□□□□□ -1.49
GTF2A1P52655 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.74□□□□□ -1.49
GTF2A1P52655 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GTF2A1P52655 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.74□□□□□ -1.49
GTF2A1P52655 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GTF2A1P52655 AL133243.2-201ENST00000610331 1621 ntBASIC5.74□□□□□ -1.49
GTF2A1P52655 EEF1A1P16-201ENST00000325349 1414 ntBASIC5.74□□□□□ -1.49
GTF2A1P52655 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
GTF2A1P52655 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.73□□□□□ -1.49
GTF2A1P52655 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
GTF2A1P52655 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
GTF2A1P52655 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.73□□□□□ -1.49
GTF2A1P52655 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
GTF2A1P52655 AL138847.1-201ENST00000258651 546 ntBASIC5.73□□□□□ -1.49
GTF2A1P52655 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.73□□□□□ -1.49
GTF2A1P52655 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
GTF2A1P52655 FDPSP5-201ENST00000399474 1057 ntBASIC5.73□□□□□ -1.49
GTF2A1P52655 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.73□□□□□ -1.49
GTF2A1P52655 RN7SKP137-201ENST00000411074 307 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms