Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.51□□□□□ -1.37
SSR1P43307 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SSR1P43307 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.51□□□□□ -1.37
SSR1P43307 AC093816.1-201ENST00000515076 913 ntBASIC6.51□□□□□ -1.37
SSR1P43307 AL671862.1-201ENST00000515851 349 ntBASIC6.51□□□□□ -1.37
SSR1P43307 RNA5SP206-201ENST00000516703 121 ntBASIC6.51□□□□□ -1.37
SSR1P43307 RPA2P3-201ENST00000533268 770 ntBASIC6.51□□□□□ -1.37
SSR1P43307 TDGP1-201ENST00000543961 1229 ntBASIC6.51□□□□□ -1.37
SSR1P43307 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.51□□□□□ -1.37
SSR1P43307 AC090651.1-201ENST00000567865 634 ntBASIC6.51□□□□□ -1.37
SSR1P43307 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.51□□□□□ -1.37
SSR1P43307 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.51□□□□□ -1.37
SSR1P43307 AC012368.3-201ENST00000604190 219 ntBASIC6.51□□□□□ -1.37
SSR1P43307 SNORA74.4-201ENST00000607595 199 ntBASIC6.51□□□□□ -1.37
SSR1P43307 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.51□□□□□ -1.37
SSR1P43307 MIR6774-201ENST00000614651 70 ntBASIC6.51□□□□□ -1.37
SSR1P43307 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.51□□□□□ -1.37
SSR1P43307 AC211486.4-201ENST00000621495 113 ntBASIC6.51□□□□□ -1.37
SSR1P43307 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.51□□□□□ -1.37
SSR1P43307 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SSR1P43307 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSR1P43307 AL034546.1-201ENST00000623740 3693 ntBASIC6.51□□□□□ -1.37
SSR1P43307 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSR1P43307 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSR1P43307 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSR1P43307 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.5□□□□□ -1.37
SSR1P43307 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSR1P43307 AC110373.1-201ENST00000505994 3505 ntBASIC6.5□□□□□ -1.37
SSR1P43307 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSR1P43307 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSR1P43307 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSR1P43307 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SSR1P43307 RNA5SP77-201ENST00000365394 120 ntBASIC6.5□□□□□ -1.37
SSR1P43307 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.5□□□□□ -1.37
SSR1P43307 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSR1P43307 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.5□□□□□ -1.37
SSR1P43307 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.5□□□□□ -1.37
SSR1P43307 OR6C64P-201ENST00000419708 825 ntBASIC6.5□□□□□ -1.37
SSR1P43307 PRUNEP1-201ENST00000425846 705 ntBASIC6.5□□□□□ -1.37
SSR1P43307 RPS7P14-201ENST00000426405 583 ntBASIC6.5□□□□□ -1.37
SSR1P43307 AC112492.2-201ENST00000432774 1030 ntBASIC6.5□□□□□ -1.37
SSR1P43307 SOCS5P1-201ENST00000440415 949 ntBASIC6.5□□□□□ -1.37
SSR1P43307 POU5F1P5-201ENST00000445059 658 ntBASIC6.5□□□□□ -1.37
SSR1P43307 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.5□□□□□ -1.37
SSR1P43307 AL133351.3-201ENST00000454998 193 ntBASIC6.5□□□□□ -1.37
SSR1P43307 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.5□□□□□ -1.37
SSR1P43307 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.5□□□□□ -1.37
SSR1P43307 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.5□□□□□ -1.37
SSR1P43307 OR10D4P-201ENST00000525892 951 ntBASIC6.5□□□□□ -1.37
SSR1P43307 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.5□□□□□ -1.37
SSR1P43307 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.5□□□□□ -1.37
SSR1P43307 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.5□□□□□ -1.37
SSR1P43307 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.5□□□□□ -1.37
SSR1P43307 DPRXP4-201ENST00000578053 568 ntBASIC6.5□□□□□ -1.37
SSR1P43307 AC020916.2-201ENST00000591242 360 ntBASIC6.5□□□□□ -1.37
SSR1P43307 MIR6811-201ENST00000620409 58 ntBASIC6.5□□□□□ -1.37
SSR1P43307 AL122023.1-201ENST00000622847 530 ntBASIC6.5□□□□□ -1.37
SSR1P43307 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.5□□□□□ -1.37
SSR1P43307 AC007603.3-201ENST00000636915 979 ntBASIC6.5□□□□□ -1.37
SSR1P43307 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSR1P43307 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
SSR1P43307 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSR1P43307 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.5□□□□□ -1.37
SSR1P43307 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
SSR1P43307 BCORP1-203ENST00000513194 5093 ntBASIC6.5□□□□□ -1.37
SSR1P43307 AC109446.4-201ENST00000623235 2755 ntBASIC6.5□□□□□ -1.37
SSR1P43307 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.5□□□□□ -1.37
SSR1P43307 CASC19-246ENST00000641625 1606 ntBASIC6.5□□□□□ -1.37
SSR1P43307 AC022164.1-201ENST00000568767 2673 ntBASIC6.5□□□□□ -1.37
SSR1P43307 MTCO1P15-201ENST00000529569 1526 ntBASIC6.5□□□□□ -1.37
SSR1P43307 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSR1P43307 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
SSR1P43307 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSR1P43307 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
SSR1P43307 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSR1P43307 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSR1P43307 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSR1P43307 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSR1P43307 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.49□□□□□ -1.37
SSR1P43307 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SSR1P43307 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSR1P43307 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSR1P43307 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
SSR1P43307 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSR1P43307 RNA5SP375-201ENST00000362975 119 ntBASIC6.49□□□□□ -1.37
SSR1P43307 RN7SKP121-201ENST00000410842 305 ntBASIC6.49□□□□□ -1.37
SSR1P43307 SETP15-201ENST00000412724 337 ntBASIC6.49□□□□□ -1.37
SSR1P43307 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.49□□□□□ -1.37
SSR1P43307 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.49□□□□□ -1.37
SSR1P43307 HSPE1P16-201ENST00000426640 348 ntBASIC6.49□□□□□ -1.37
SSR1P43307 AC016027.5-201ENST00000427227 210 ntBASIC6.49□□□□□ -1.37
SSR1P43307 GAPDHP19-201ENST00000431768 1005 ntBASIC6.49□□□□□ -1.37
SSR1P43307 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.49□□□□□ -1.37
SSR1P43307 AC010086.1-201ENST00000437359 1052 ntBASIC6.49□□□□□ -1.37
SSR1P43307 PPIAP10-201ENST00000438675 458 ntBASIC6.49□□□□□ -1.37
SSR1P43307 OR2L9P-201ENST00000444456 913 ntBASIC6.49□□□□□ -1.37
SSR1P43307 GAPDHP23-201ENST00000444823 993 ntBASIC6.49□□□□□ -1.37
SSR1P43307 RPL5P10-201ENST00000445207 894 ntBASIC6.49□□□□□ -1.37
SSR1P43307 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SSR1P43307 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms