Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXD13P35453 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXD13P35453 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.57□□□□□ -1.36
HOXD13P35453 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXD13P35453 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXD13P35453 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXD13P35453 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.57□□□□□ -1.36
HOXD13P35453 MTCO1P28-201ENST00000574177 1528 ntBASIC6.57□□□□□ -1.36
HOXD13P35453 AC130304.1-201ENST00000622942 2385 ntBASIC6.57□□□□□ -1.36
HOXD13P35453 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXD13P35453 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXD13P35453 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
HOXD13P35453 SNORA70.9-201ENST00000384370 135 ntBASIC6.57□□□□□ -1.36
HOXD13P35453 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HOXD13P35453 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HOXD13P35453 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HOXD13P35453 AC096644.3-201ENST00000416788 338 ntBASIC6.57□□□□□ -1.36
HOXD13P35453 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.57□□□□□ -1.36
HOXD13P35453 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.57□□□□□ -1.36
HOXD13P35453 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.57□□□□□ -1.36
HOXD13P35453 AL365220.1-201ENST00000432923 399 ntBASIC6.57□□□□□ -1.36
HOXD13P35453 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HOXD13P35453 RPSAP40-201ENST00000442343 891 ntBASIC6.57□□□□□ -1.36
HOXD13P35453 RPS7P3-201ENST00000443360 580 ntBASIC6.57□□□□□ -1.36
HOXD13P35453 CUBNP2-201ENST00000443534 1139 ntBASIC6.57□□□□□ -1.36
HOXD13P35453 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HOXD13P35453 AC118758.1-202ENST00000454719 225 ntBASIC6.57□□□□□ -1.36
HOXD13P35453 Z83838.1-202ENST00000456225 839 ntBASIC6.57□□□□□ -1.36
HOXD13P35453 GOLGA5P1-201ENST00000507317 980 ntBASIC6.57□□□□□ -1.36
HOXD13P35453 RNU6-551P-201ENST00000516661 103 ntBASIC6.57□□□□□ -1.36
HOXD13P35453 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.57□□□□□ -1.36
HOXD13P35453 OR56A7P-201ENST00000524865 941 ntBASIC6.57□□□□□ -1.36
HOXD13P35453 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXD13P35453 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.57□□□□□ -1.36
HOXD13P35453 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.57□□□□□ -1.36
HOXD13P35453 AC116158.1-201ENST00000560231 2129 ntBASIC6.57□□□□□ -1.36
HOXD13P35453 AC026826.3-201ENST00000561747 158 ntBASIC6.57□□□□□ -1.36
HOXD13P35453 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXD13P35453 AC005224.3-201ENST00000584683 2140 ntBASIC6.57□□□□□ -1.36
HOXD13P35453 AC092681.3-201ENST00000609463 678 ntBASIC6.57□□□□□ -1.36
HOXD13P35453 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.57□□□□□ -1.36
HOXD13P35453 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.57□□□□□ -1.36
HOXD13P35453 AL161756.3-201ENST00000641216 2071 ntBASIC6.57□□□□□ -1.36
HOXD13P35453 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXD13P35453 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HOXD13P35453 GNL2P1-201ENST00000451274 2190 ntBASIC6.57□□□□□ -1.36
HOXD13P35453 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
HOXD13P35453 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HOXD13P35453 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXD13P35453 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.56□□□□□ -1.36
HOXD13P35453 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
HOXD13P35453 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.56□□□□□ -1.36
HOXD13P35453 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.56□□□□□ -1.36
HOXD13P35453 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXD13P35453 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
HOXD13P35453 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HOXD13P35453 RNA5SP514-201ENST00000363717 111 ntBASIC6.56□□□□□ -1.36
HOXD13P35453 RNA5SP211-201ENST00000365516 117 ntBASIC6.56□□□□□ -1.36
HOXD13P35453 GNG5P2-201ENST00000372054 207 ntBASIC6.56□□□□□ -1.36
HOXD13P35453 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXD13P35453 MYL6P5-201ENST00000412707 459 ntBASIC6.56□□□□□ -1.36
HOXD13P35453 CBX1P3-201ENST00000413296 527 ntBASIC6.56□□□□□ -1.36
HOXD13P35453 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.56□□□□□ -1.36
HOXD13P35453 RPS7P8-201ENST00000418311 581 ntBASIC6.56□□□□□ -1.36
HOXD13P35453 KIF4CP-201ENST00000422742 1279 ntBASIC6.56□□□□□ -1.36
HOXD13P35453 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.56□□□□□ -1.36
HOXD13P35453 AC097523.2-201ENST00000435551 652 ntBASIC6.56□□□□□ -1.36
HOXD13P35453 BX679664.2-201ENST00000439282 283 ntBASIC6.56□□□□□ -1.36
HOXD13P35453 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.56□□□□□ -1.36
HOXD13P35453 RPL38P3-201ENST00000484463 213 ntBASIC6.56□□□□□ -1.36
HOXD13P35453 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.56□□□□□ -1.36
HOXD13P35453 RN7SKP238-201ENST00000516483 249 ntBASIC6.56□□□□□ -1.36
HOXD13P35453 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.56□□□□□ -1.36
HOXD13P35453 BCAS2P1-201ENST00000528022 632 ntBASIC6.56□□□□□ -1.36
HOXD13P35453 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.56□□□□□ -1.36
HOXD13P35453 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.56□□□□□ -1.36
HOXD13P35453 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.56□□□□□ -1.36
HOXD13P35453 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXD13P35453 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.56□□□□□ -1.36
HOXD13P35453 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.56□□□□□ -1.36
HOXD13P35453 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.56□□□□□ -1.36
HOXD13P35453 LINC00556-201ENST00000569603 412 ntBASIC6.56□□□□□ -1.36
HOXD13P35453 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.56□□□□□ -1.36
HOXD13P35453 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.56□□□□□ -1.36
HOXD13P35453 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.56□□□□□ -1.36
HOXD13P35453 AC096708.4-201ENST00000620563 552 ntBASIC6.56□□□□□ -1.36
HOXD13P35453 AC069234.4-201ENST00000621276 412 ntBASIC6.56□□□□□ -1.36
HOXD13P35453 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
HOXD13P35453 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXD13P35453 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXD13P35453 RBPJP7-201ENST00000442803 1447 ntBASIC6.56□□□□□ -1.36
HOXD13P35453 RBPJP5-201ENST00000449433 1447 ntBASIC6.56□□□□□ -1.36
HOXD13P35453 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HOXD13P35453 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXD13P35453 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
HOXD13P35453 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
HOXD13P35453 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.56□□□□□ -1.36
HOXD13P35453 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXD13P35453 IMMTP1-201ENST00000435590 2219 ntBASIC6.56□□□□□ -1.36
HOXD13P35453 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms