Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL049840.6-201ENST00000604583 345 ntBASIC9.34□□□□□ -0.91
CLIP1P30622 MIR193BHG-214ENST00000641765 509 ntBASIC9.34□□□□□ -0.91
CLIP1P30622 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CLIP1P30622 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
CLIP1P30622 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
CLIP1P30622 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
CLIP1P30622 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC9.34□□□□□ -0.91
CLIP1P30622 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
CLIP1P30622 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CLIP1P30622 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CLIP1P30622 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CLIP1P30622 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC9.33□□□□□ -0.92
CLIP1P30622 HIST1H3PS1-201ENST00000404612 417 ntBASIC9.33□□□□□ -0.92
CLIP1P30622 MIR1178-201ENST00000408396 91 ntBASIC9.33□□□□□ -0.92
CLIP1P30622 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC9.33□□□□□ -0.92
CLIP1P30622 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC9.33□□□□□ -0.92
CLIP1P30622 AL603882.1-201ENST00000463059 681 ntBASIC9.33□□□□□ -0.92
CLIP1P30622 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC9.33□□□□□ -0.92
CLIP1P30622 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC9.33□□□□□ -0.92
CLIP1P30622 AC090424.1-201ENST00000535243 736 ntBASIC9.33□□□□□ -0.92
CLIP1P30622 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC9.33□□□□□ -0.92
CLIP1P30622 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC9.33□□□□□ -0.92
CLIP1P30622 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
CLIP1P30622 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CLIP1P30622 AC010401.2-201ENST00000575137 4934 ntBASIC9.33□□□□□ -0.92
CLIP1P30622 FGG-205ENST00000407946 1636 ntTSL 5 BASIC9.33□□□□□ -0.92
CLIP1P30622 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CLIP1P30622 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CLIP1P30622 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CLIP1P30622 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CLIP1P30622 AC005224.3-201ENST00000584683 2140 ntBASIC9.32□□□□□ -0.92
CLIP1P30622 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
CLIP1P30622 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CLIP1P30622 HSPD1P8-201ENST00000400121 1658 ntBASIC9.32□□□□□ -0.92
CLIP1P30622 MAPK10-261ENST00000641050 3109 ntBASIC9.32□□□□□ -0.92
CLIP1P30622 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CLIP1P30622 RNA5SP46-201ENST00000362370 120 ntBASIC9.32□□□□□ -0.92
CLIP1P30622 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CLIP1P30622 BMS1P17-202ENST00000416720 316 ntBASIC9.32□□□□□ -0.92
CLIP1P30622 AC073909.1-201ENST00000447112 999 ntBASIC9.32□□□□□ -0.92
CLIP1P30622 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC9.32□□□□□ -0.92
CLIP1P30622 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CLIP1P30622 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC9.32□□□□□ -0.92
CLIP1P30622 AL589674.2-201ENST00000604304 337 ntBASIC9.32□□□□□ -0.92
CLIP1P30622 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC9.32□□□□□ -0.92
CLIP1P30622 AC069234.4-201ENST00000621276 412 ntBASIC9.32□□□□□ -0.92
CLIP1P30622 AC087565.3-203ENST00000641018 837 ntBASIC9.32□□□□□ -0.92
CLIP1P30622 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CLIP1P30622 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC9.32□□□□□ -0.92
CLIP1P30622 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CLIP1P30622 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC9.32□□□□□ -0.92
CLIP1P30622 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CLIP1P30622 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC9.32□□□□□ -0.92
CLIP1P30622 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CLIP1P30622 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CLIP1P30622 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CLIP1P30622 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CLIP1P30622 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC9.31□□□□□ -0.92
CLIP1P30622 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
CLIP1P30622 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC9.31□□□□□ -0.92
CLIP1P30622 AL596448.1-201ENST00000415024 392 ntBASIC9.31□□□□□ -0.92
CLIP1P30622 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC9.31□□□□□ -0.92
CLIP1P30622 AC002504.1-201ENST00000438281 691 ntBASIC9.31□□□□□ -0.92
CLIP1P30622 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC9.31□□□□□ -0.92
CLIP1P30622 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC9.31□□□□□ -0.92
CLIP1P30622 AC026348.1-201ENST00000462549 1053 ntBASIC9.31□□□□□ -0.92
CLIP1P30622 RPS3AP15-201ENST00000483874 781 ntBASIC9.31□□□□□ -0.92
CLIP1P30622 AC009120.1-201ENST00000493458 473 ntBASIC9.31□□□□□ -0.92
CLIP1P30622 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC9.31□□□□□ -0.92
CLIP1P30622 AC016180.1-201ENST00000567945 403 ntBASIC9.31□□□□□ -0.92
CLIP1P30622 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC9.31□□□□□ -0.92
CLIP1P30622 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC9.31□□□□□ -0.92
CLIP1P30622 AP000864.1-201ENST00000609424 650 ntBASIC9.31□□□□□ -0.92
CLIP1P30622 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CLIP1P30622 AC016251.2-201ENST00000623393 3089 ntBASIC9.31□□□□□ -0.92
CLIP1P30622 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
CLIP1P30622 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CLIP1P30622 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC9.31□□□□□ -0.92
CLIP1P30622 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CLIP1P30622 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
CLIP1P30622 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC9.31□□□□□ -0.92
CLIP1P30622 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC9.31□□□□□ -0.92
CLIP1P30622 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CLIP1P30622 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
CLIP1P30622 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC9.31□□□□□ -0.92
CLIP1P30622 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CLIP1P30622 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CLIP1P30622 EIF4A1P6-201ENST00000448133 1210 ntBASIC9.31□□□□□ -0.92
CLIP1P30622 AC022215.1-201ENST00000481770 362 ntBASIC9.31□□□□□ -0.92
CLIP1P30622 RN7SL466P-201ENST00000497546 295 ntBASIC9.31□□□□□ -0.92
CLIP1P30622 FTH1P8-201ENST00000498161 514 ntBASIC9.31□□□□□ -0.92
CLIP1P30622 AC138866.2-201ENST00000508650 584 ntBASIC9.31□□□□□ -0.92
CLIP1P30622 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC9.31□□□□□ -0.92
CLIP1P30622 AC139365.2-201ENST00000517972 253 ntBASIC9.31□□□□□ -0.92
CLIP1P30622 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC9.31□□□□□ -0.92
CLIP1P30622 MIR6719-201ENST00000622428 87 ntBASIC9.31□□□□□ -0.92
CLIP1P30622 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
CLIP1P30622 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CLIP1P30622 WBP11P1-201ENST00000562560 1931 ntBASIC9.3□□□□□ -0.92
CLIP1P30622 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms