Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC8.14□□□□□ -1.11
RFX1P22670 AC010587.2-201ENST00000511727 448 ntBASIC8.14□□□□□ -1.11
RFX1P22670 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC8.14□□□□□ -1.11
RFX1P22670 AC007954.1-201ENST00000554198 494 ntBASIC8.14□□□□□ -1.11
RFX1P22670 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC8.14□□□□□ -1.11
RFX1P22670 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
RFX1P22670 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC8.14□□□□□ -1.11
RFX1P22670 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC8.14□□□□□ -1.11
RFX1P22670 AC006362.1-201ENST00000567392 174 ntBASIC8.14□□□□□ -1.11
RFX1P22670 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC8.14□□□□□ -1.11
RFX1P22670 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC8.14□□□□□ -1.11
RFX1P22670 ANKRD20A19P-203ENST00000602724 295 ntBASIC8.14□□□□□ -1.11
RFX1P22670 AP005137.2-201ENST00000609238 400 ntBASIC8.14□□□□□ -1.11
RFX1P22670 MIR8082-201ENST00000612488 81 ntBASIC8.14□□□□□ -1.11
RFX1P22670 AC092794.1-201ENST00000612734 582 ntBASIC8.14□□□□□ -1.11
RFX1P22670 MIAT_exon1.1-201ENST00000617016 135 ntBASIC8.14□□□□□ -1.11
RFX1P22670 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC8.14□□□□□ -1.11
RFX1P22670 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
RFX1P22670 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC8.14□□□□□ -1.11
RFX1P22670 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RFX1P22670 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RFX1P22670 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
RFX1P22670 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC8.14□□□□□ -1.11
RFX1P22670 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RFX1P22670 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RFX1P22670 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
RFX1P22670 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
RFX1P22670 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.14□□□□□ -1.11
RFX1P22670 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RFX1P22670 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RFX1P22670 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC8.13□□□□□ -1.11
RFX1P22670 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC8.13□□□□□ -1.11
RFX1P22670 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC8.13□□□□□ -1.11
RFX1P22670 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
RFX1P22670 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
RFX1P22670 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC8.13□□□□□ -1.11
RFX1P22670 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC8.13□□□□□ -1.11
RFX1P22670 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
RFX1P22670 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
RFX1P22670 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RFX1P22670 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
RFX1P22670 RNA5SP79-201ENST00000365193 109 ntBASIC8.13□□□□□ -1.11
RFX1P22670 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RFX1P22670 MIR498-201ENST00000385134 124 ntBASIC8.13□□□□□ -1.11
RFX1P22670 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
RFX1P22670 SNORA26.8-201ENST00000391306 124 ntBASIC8.13□□□□□ -1.11
RFX1P22670 HMGB3P1-201ENST00000393368 573 ntBASIC8.13□□□□□ -1.11
RFX1P22670 RNU6-920P-201ENST00000410926 92 ntBASIC8.13□□□□□ -1.11
RFX1P22670 AL133325.1-201ENST00000421090 382 ntBASIC8.13□□□□□ -1.11
RFX1P22670 RPSAP1-201ENST00000421328 880 ntBASIC8.13□□□□□ -1.11
RFX1P22670 CENPIP1-201ENST00000425713 902 ntBASIC8.13□□□□□ -1.11
RFX1P22670 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC8.13□□□□□ -1.11
RFX1P22670 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC8.13□□□□□ -1.11
RFX1P22670 AL031667.1-201ENST00000440222 725 ntBASIC8.13□□□□□ -1.11
RFX1P22670 MTCO1P19-201ENST00000443487 500 ntBASIC8.13□□□□□ -1.11
RFX1P22670 ARL5AP2-201ENST00000444698 533 ntBASIC8.13□□□□□ -1.11
RFX1P22670 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RFX1P22670 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC8.13□□□□□ -1.11
RFX1P22670 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC8.13□□□□□ -1.11
RFX1P22670 AC239798.3-201ENST00000454459 408 ntBASIC8.13□□□□□ -1.11
RFX1P22670 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC8.13□□□□□ -1.11
RFX1P22670 HNRNPDLP3-201ENST00000456745 380 ntBASIC8.13□□□□□ -1.11
RFX1P22670 RN7SL233P-201ENST00000469988 277 ntBASIC8.13□□□□□ -1.11
RFX1P22670 GAPDHP39-201ENST00000481866 979 ntBASIC8.13□□□□□ -1.11
RFX1P22670 RN7SL335P-201ENST00000482790 304 ntBASIC8.13□□□□□ -1.11
RFX1P22670 PFN1P8-201ENST00000497012 543 ntBASIC8.13□□□□□ -1.11
RFX1P22670 AC105391.1-201ENST00000503155 1045 ntBASIC8.13□□□□□ -1.11
RFX1P22670 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC8.13□□□□□ -1.11
RFX1P22670 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RFX1P22670 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC8.13□□□□□ -1.11
RFX1P22670 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC8.13□□□□□ -1.11
RFX1P22670 DUX4L52-201ENST00000549363 777 ntBASIC8.13□□□□□ -1.11
RFX1P22670 NF1P12-201ENST00000549593 583 ntBASIC8.13□□□□□ -1.11
RFX1P22670 COX6CP11-201ENST00000555293 229 ntBASIC8.13□□□□□ -1.11
RFX1P22670 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC8.13□□□□□ -1.11
RFX1P22670 AC090415.1-201ENST00000581877 847 ntBASIC8.13□□□□□ -1.11
RFX1P22670 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC8.13□□□□□ -1.11
RFX1P22670 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC8.13□□□□□ -1.11
RFX1P22670 WISP1-OT1-201ENST00000602893 642 ntBASIC8.13□□□□□ -1.11
RFX1P22670 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC8.13□□□□□ -1.11
RFX1P22670 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC8.13□□□□□ -1.11
RFX1P22670 SNORD91A-202ENST00000609620 191 ntBASIC8.13□□□□□ -1.11
RFX1P22670 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC8.13□□□□□ -1.11
RFX1P22670 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC8.13□□□□□ -1.11
RFX1P22670 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC8.13□□□□□ -1.11
RFX1P22670 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
RFX1P22670 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RFX1P22670 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RFX1P22670 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RFX1P22670 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RFX1P22670 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC8.13□□□□□ -1.11
RFX1P22670 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
RFX1P22670 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC8.13□□□□□ -1.11
RFX1P22670 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC8.13□□□□□ -1.11
RFX1P22670 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RFX1P22670 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC8.12□□□□□ -1.11
RFX1P22670 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC8.12□□□□□ -1.11
RFX1P22670 GTF2H2B-203ENST00000508065 1432 ntBASIC8.12□□□□□ -1.11
RFX1P22670 AC018688.1-201ENST00000636528 1754 ntBASIC8.12□□□□□ -1.11
RFX1P22670 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms