Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CYCSP1-201ENST00000604815 315 ntBASIC6.81□□□□□ -1.32
HOXC6P09630 FAM27E4-201ENST00000605259 342 ntBASIC6.81□□□□□ -1.32
HOXC6P09630 AL021918.2-201ENST00000613415 194 ntBASIC6.81□□□□□ -1.32
HOXC6P09630 AL445670.1-201ENST00000618889 801 ntBASIC6.81□□□□□ -1.32
HOXC6P09630 AC002044.3-201ENST00000623314 541 ntBASIC6.81□□□□□ -1.32
HOXC6P09630 CU639417.4-201ENST00000623928 207 ntBASIC6.81□□□□□ -1.32
HOXC6P09630 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.81□□□□□ -1.32
HOXC6P09630 AP001541.1-201ENST00000623322 1904 ntBASIC6.81□□□□□ -1.32
HOXC6P09630 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXC6P09630 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.81□□□□□ -1.32
HOXC6P09630 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXC6P09630 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXC6P09630 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXC6P09630 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXC6P09630 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXC6P09630 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXC6P09630 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.8□□□□□ -1.32
HOXC6P09630 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.8□□□□□ -1.32
HOXC6P09630 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXC6P09630 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXC6P09630 AL391261.1-201ENST00000555712 1479 ntBASIC6.8□□□□□ -1.32
HOXC6P09630 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXC6P09630 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXC6P09630 EPS15P1-202ENST00000459691 2071 ntBASIC6.8□□□□□ -1.32
HOXC6P09630 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
HOXC6P09630 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
HOXC6P09630 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.8□□□□□ -1.32
HOXC6P09630 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXC6P09630 AL596448.1-201ENST00000415024 392 ntBASIC6.8□□□□□ -1.32
HOXC6P09630 RPL36P18-201ENST00000419316 318 ntBASIC6.8□□□□□ -1.32
HOXC6P09630 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.8□□□□□ -1.32
HOXC6P09630 AC126120.1-201ENST00000431082 470 ntBASIC6.8□□□□□ -1.32
HOXC6P09630 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXC6P09630 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXC6P09630 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.8□□□□□ -1.32
HOXC6P09630 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.8□□□□□ -1.32
HOXC6P09630 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXC6P09630 AC108693.1-201ENST00000496068 432 ntBASIC6.8□□□□□ -1.32
HOXC6P09630 DUTP7-201ENST00000507982 486 ntBASIC6.8□□□□□ -1.32
HOXC6P09630 GAPDHP71-201ENST00000511530 1003 ntBASIC6.8□□□□□ -1.32
HOXC6P09630 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.8□□□□□ -1.32
HOXC6P09630 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.8□□□□□ -1.32
HOXC6P09630 AC022784.5-201ENST00000522241 437 ntBASIC6.8□□□□□ -1.32
HOXC6P09630 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXC6P09630 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXC6P09630 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXC6P09630 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.8□□□□□ -1.32
HOXC6P09630 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXC6P09630 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.8□□□□□ -1.32
HOXC6P09630 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXC6P09630 AC067852.5-201ENST00000589299 310 ntBASIC6.8□□□□□ -1.32
HOXC6P09630 AC119403.2-201ENST00000590960 598 ntBASIC6.8□□□□□ -1.32
HOXC6P09630 AC008536.1-201ENST00000602872 669 ntBASIC6.8□□□□□ -1.32
HOXC6P09630 AL021707.7-201ENST00000607991 416 ntBASIC6.8□□□□□ -1.32
HOXC6P09630 AC211433.2-201ENST00000608433 387 ntBASIC6.8□□□□□ -1.32
HOXC6P09630 AC016252.1-201ENST00000609721 474 ntBASIC6.8□□□□□ -1.32
HOXC6P09630 AL035661.1-201ENST00000620459 1144 ntBASIC6.8□□□□□ -1.32
HOXC6P09630 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXC6P09630 AC103798.2-201ENST00000624292 632 ntBASIC6.8□□□□□ -1.32
HOXC6P09630 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXC6P09630 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXC6P09630 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXC6P09630 AC092692.1-201ENST00000623625 2595 ntBASIC6.8□□□□□ -1.32
HOXC6P09630 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
HOXC6P09630 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.8□□□□□ -1.32
HOXC6P09630 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXC6P09630 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXC6P09630 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXC6P09630 HDAC1P2-201ENST00000453661 1398 ntBASIC6.8□□□□□ -1.32
HOXC6P09630 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
HOXC6P09630 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.79□□□□□ -1.32
HOXC6P09630 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
HOXC6P09630 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
HOXC6P09630 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXC6P09630 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.79□□□□□ -1.32
HOXC6P09630 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
HOXC6P09630 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXC6P09630 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXC6P09630 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXC6P09630 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXC6P09630 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
HOXC6P09630 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
HOXC6P09630 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
HOXC6P09630 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
HOXC6P09630 MIR937-201ENST00000401271 86 ntBASIC6.79□□□□□ -1.32
HOXC6P09630 SNRPEP6-201ENST00000407465 277 ntBASIC6.79□□□□□ -1.32
HOXC6P09630 OR2AT2P-201ENST00000413438 905 ntBASIC6.79□□□□□ -1.32
HOXC6P09630 NPM1P4-201ENST00000414095 812 ntBASIC6.79□□□□□ -1.32
HOXC6P09630 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.79□□□□□ -1.32
HOXC6P09630 NME1P1-201ENST00000420914 382 ntBASIC6.79□□□□□ -1.32
HOXC6P09630 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXC6P09630 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.79□□□□□ -1.32
HOXC6P09630 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXC6P09630 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HOXC6P09630 RN7SL515P-201ENST00000463999 297 ntBASIC6.79□□□□□ -1.32
HOXC6P09630 AC006539.1-201ENST00000481419 501 ntBASIC6.79□□□□□ -1.32
HOXC6P09630 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXC6P09630 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.79□□□□□ -1.32
HOXC6P09630 IGLV2-28-201ENST00000520681 304 ntBASIC6.79□□□□□ -1.32
HOXC6P09630 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms