Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TPM1P09493 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TPM1P09493 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TPM1P09493 RN7SKP69-201ENST00000365390 305 ntBASIC6.54□□□□□ -1.36
TPM1P09493 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TPM1P09493 AL033519.1-201ENST00000407266 307 ntBASIC6.54□□□□□ -1.36
TPM1P09493 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TPM1P09493 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TPM1P09493 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.54□□□□□ -1.36
TPM1P09493 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
TPM1P09493 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.54□□□□□ -1.36
TPM1P09493 TREML3P-201ENST00000457327 501 ntBASIC6.54□□□□□ -1.36
TPM1P09493 RN7SL39P-201ENST00000462264 297 ntBASIC6.54□□□□□ -1.36
TPM1P09493 RN7SL197P-201ENST00000466981 299 ntBASIC6.54□□□□□ -1.36
TPM1P09493 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC6.54□□□□□ -1.36
TPM1P09493 RN7SL83P-201ENST00000468131 297 ntBASIC6.54□□□□□ -1.36
TPM1P09493 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TPM1P09493 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.54□□□□□ -1.36
TPM1P09493 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.54□□□□□ -1.36
TPM1P09493 AC073648.3-201ENST00000504939 925 ntBASIC6.54□□□□□ -1.36
TPM1P09493 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.54□□□□□ -1.36
TPM1P09493 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.54□□□□□ -1.36
TPM1P09493 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.54□□□□□ -1.36
TPM1P09493 AC124891.1-201ENST00000536322 519 ntBASIC6.54□□□□□ -1.36
TPM1P09493 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.54□□□□□ -1.36
TPM1P09493 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.54□□□□□ -1.36
TPM1P09493 AC090286.3-201ENST00000573133 187 ntBASIC6.54□□□□□ -1.36
TPM1P09493 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.54□□□□□ -1.36
TPM1P09493 AC010503.3-201ENST00000594355 540 ntBASIC6.54□□□□□ -1.36
TPM1P09493 AP001823.1-201ENST00000604056 1003 ntBASIC6.54□□□□□ -1.36
TPM1P09493 AL008582.1-201ENST00000609612 442 ntBASIC6.54□□□□□ -1.36
TPM1P09493 uc_338.26-201ENST00000612659 160 ntBASIC6.54□□□□□ -1.36
TPM1P09493 AL355974.3-201ENST00000617383 467 ntBASIC6.54□□□□□ -1.36
TPM1P09493 CLUHP10-201ENST00000631979 980 ntBASIC6.54□□□□□ -1.36
TPM1P09493 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.54□□□□□ -1.36
TPM1P09493 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.54□□□□□ -1.36
TPM1P09493 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.54□□□□□ -1.36
TPM1P09493 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TPM1P09493 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
TPM1P09493 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
TPM1P09493 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.53□□□□□ -1.36
TPM1P09493 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TPM1P09493 MAPK10-338ENST00000641647 3362 ntBASIC6.53□□□□□ -1.36
TPM1P09493 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.53□□□□□ -1.36
TPM1P09493 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
TPM1P09493 RNA5SP187-201ENST00000384400 119 ntBASIC6.53□□□□□ -1.36
TPM1P09493 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TPM1P09493 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.53□□□□□ -1.36
TPM1P09493 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TPM1P09493 AC006509.1-201ENST00000420788 634 ntBASIC6.53□□□□□ -1.36
TPM1P09493 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.53□□□□□ -1.36
TPM1P09493 RPL12P12-201ENST00000424633 501 ntBASIC6.53□□□□□ -1.36
TPM1P09493 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.53□□□□□ -1.36
TPM1P09493 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
TPM1P09493 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.53□□□□□ -1.36
TPM1P09493 AL512593.1-201ENST00000444758 779 ntBASIC6.53□□□□□ -1.36
TPM1P09493 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TPM1P09493 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.53□□□□□ -1.36
TPM1P09493 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.53□□□□□ -1.36
TPM1P09493 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.53□□□□□ -1.36
TPM1P09493 AL603882.1-201ENST00000463059 681 ntBASIC6.53□□□□□ -1.36
TPM1P09493 PFN1P6-201ENST00000476786 399 ntBASIC6.53□□□□□ -1.36
TPM1P09493 RN7SL104P-201ENST00000498686 293 ntBASIC6.53□□□□□ -1.36
TPM1P09493 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC6.53□□□□□ -1.36
TPM1P09493 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.53□□□□□ -1.36
TPM1P09493 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.53□□□□□ -1.36
TPM1P09493 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.53□□□□□ -1.36
TPM1P09493 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.53□□□□□ -1.36
TPM1P09493 AC090424.1-201ENST00000535243 736 ntBASIC6.53□□□□□ -1.36
TPM1P09493 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.53□□□□□ -1.36
TPM1P09493 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.53□□□□□ -1.36
TPM1P09493 AC084824.2-201ENST00000548906 345 ntBASIC6.53□□□□□ -1.36
TPM1P09493 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC6.53□□□□□ -1.36
TPM1P09493 AC090826.1-203ENST00000569235 490 ntBASIC6.53□□□□□ -1.36
TPM1P09493 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.53□□□□□ -1.36
TPM1P09493 TXNP4-201ENST00000575018 310 ntBASIC6.53□□□□□ -1.36
TPM1P09493 MIR4732-201ENST00000581873 76 ntBASIC6.53□□□□□ -1.36
TPM1P09493 AL049829.3-202ENST00000604278 711 ntBASIC6.53□□□□□ -1.36
TPM1P09493 MIR6849-201ENST00000618543 69 ntBASIC6.53□□□□□ -1.36
TPM1P09493 AC027506.1-201ENST00000621395 198 ntBASIC6.53□□□□□ -1.36
TPM1P09493 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC6.53□□□□□ -1.36
TPM1P09493 AC099654.11-201ENST00000638857 294 ntBASIC6.53□□□□□ -1.36
TPM1P09493 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TPM1P09493 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
TPM1P09493 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.53□□□□□ -1.36
TPM1P09493 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TPM1P09493 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TPM1P09493 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
TPM1P09493 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
TPM1P09493 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.52□□□□□ -1.36
TPM1P09493 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.52□□□□□ -1.37
TPM1P09493 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
TPM1P09493 SNORD94-201ENST00000386037 137 ntBASIC6.52□□□□□ -1.37
TPM1P09493 MIR1266-201ENST00000408125 84 ntBASIC6.52□□□□□ -1.37
TPM1P09493 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.52□□□□□ -1.37
TPM1P09493 CRIP1P1-201ENST00000427567 185 ntBASIC6.52□□□□□ -1.37
TPM1P09493 AL136231.1-201ENST00000429407 730 ntBASIC6.52□□□□□ -1.37
TPM1P09493 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.52□□□□□ -1.37
TPM1P09493 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.52□□□□□ -1.37
TPM1P09493 MTND2P40-201ENST00000436718 841 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms