Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.55□□□□□ -1.36
RB1P06400 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.55□□□□□ -1.36
RB1P06400 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.55□□□□□ -1.36
RB1P06400 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
RB1P06400 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RB1P06400 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.55□□□□□ -1.36
RB1P06400 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RB1P06400 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RB1P06400 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RB1P06400 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RB1P06400 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RB1P06400 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
RB1P06400 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RB1P06400 RNA5SP132-201ENST00000364725 118 ntBASIC6.55□□□□□ -1.36
RB1P06400 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
RB1P06400 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.55□□□□□ -1.36
RB1P06400 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.55□□□□□ -1.36
RB1P06400 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.55□□□□□ -1.36
RB1P06400 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.55□□□□□ -1.36
RB1P06400 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.55□□□□□ -1.36
RB1P06400 UBE2V2P3-201ENST00000433562 437 ntBASIC6.55□□□□□ -1.36
RB1P06400 SUMO2P3-201ENST00000438311 288 ntBASIC6.55□□□□□ -1.36
RB1P06400 GAPDHP23-201ENST00000444823 993 ntBASIC6.55□□□□□ -1.36
RB1P06400 ZNF619P1-201ENST00000446539 752 ntBASIC6.55□□□□□ -1.36
RB1P06400 AC113398.2-201ENST00000507630 558 ntBASIC6.55□□□□□ -1.36
RB1P06400 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.55□□□□□ -1.36
RB1P06400 RNA5SP362-201ENST00000516048 118 ntBASIC6.55□□□□□ -1.36
RB1P06400 SNORA70.20-201ENST00000516848 126 ntBASIC6.55□□□□□ -1.36
RB1P06400 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.55□□□□□ -1.36
RB1P06400 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.55□□□□□ -1.36
RB1P06400 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
RB1P06400 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.55□□□□□ -1.36
RB1P06400 AC084337.1-201ENST00000524809 686 ntBASIC6.55□□□□□ -1.36
RB1P06400 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
RB1P06400 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
RB1P06400 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.55□□□□□ -1.36
RB1P06400 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.55□□□□□ -1.36
RB1P06400 SUMO2P15-201ENST00000604285 278 ntBASIC6.55□□□□□ -1.36
RB1P06400 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.55□□□□□ -1.36
RB1P06400 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RB1P06400 AC243960.7-201ENST00000623532 707 ntBASIC6.55□□□□□ -1.36
RB1P06400 AL691477.1-201ENST00000624398 162 ntBASIC6.55□□□□□ -1.36
RB1P06400 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.55□□□□□ -1.36
RB1P06400 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.55□□□□□ -1.36
RB1P06400 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.55□□□□□ -1.36
RB1P06400 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RB1P06400 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RB1P06400 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RB1P06400 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RB1P06400 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
RB1P06400 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RB1P06400 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.55□□□□□ -1.36
RB1P06400 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RB1P06400 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
RB1P06400 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RB1P06400 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
RB1P06400 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RB1P06400 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RB1P06400 AC120036.2-201ENST00000509729 1474 ntBASIC6.54□□□□□ -1.36
RB1P06400 AL359195.2-201ENST00000623657 4412 ntBASIC6.54□□□□□ -1.36
RB1P06400 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RB1P06400 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RB1P06400 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RB1P06400 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RB1P06400 OR2M1P-201ENST00000318104 951 ntBASIC6.54□□□□□ -1.36
RB1P06400 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RB1P06400 RPS20P25-201ENST00000412447 352 ntBASIC6.54□□□□□ -1.36
RB1P06400 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.54□□□□□ -1.36
RB1P06400 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RB1P06400 AL627308.1-201ENST00000435693 821 ntBASIC6.54□□□□□ -1.36
RB1P06400 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.54□□□□□ -1.36
RB1P06400 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
RB1P06400 SBDSP1-204ENST00000453858 737 ntBASIC6.54□□□□□ -1.36
RB1P06400 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC6.54□□□□□ -1.36
RB1P06400 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.54□□□□□ -1.36
RB1P06400 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC6.54□□□□□ -1.36
RB1P06400 SNORD116-30-201ENST00000516468 85 ntBASIC6.54□□□□□ -1.36
RB1P06400 RN7SKP5-201ENST00000517045 272 ntBASIC6.54□□□□□ -1.36
RB1P06400 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.54□□□□□ -1.36
RB1P06400 AC025857.1-201ENST00000525252 377 ntBASIC6.54□□□□□ -1.36
RB1P06400 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.54□□□□□ -1.36
RB1P06400 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.54□□□□□ -1.36
RB1P06400 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.54□□□□□ -1.36
RB1P06400 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.54□□□□□ -1.36
RB1P06400 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC6.54□□□□□ -1.36
RB1P06400 AL356801.1-201ENST00000559320 294 ntBASIC6.54□□□□□ -1.36
RB1P06400 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.54□□□□□ -1.36
RB1P06400 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.54□□□□□ -1.36
RB1P06400 AC012254.3-201ENST00000591183 2117 ntBASIC6.54□□□□□ -1.36
RB1P06400 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RB1P06400 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RB1P06400 OR7A11P-201ENST00000597719 953 ntBASIC6.54□□□□□ -1.36
RB1P06400 AC211433.2-201ENST00000608433 387 ntBASIC6.54□□□□□ -1.36
RB1P06400 AC096861.1-201ENST00000616652 240 ntBASIC6.54□□□□□ -1.36
RB1P06400 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RB1P06400 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.54□□□□□ -1.36
RB1P06400 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.54□□□□□ -1.36
RB1P06400 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RB1P06400 AL596244.1-201ENST00000567068 3779 ntBASIC6.54□□□□□ -1.36
RB1P06400 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms