Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 METTL5-204ENST00000409340 472 ntTSL 5 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 MTND6P12-201ENST00000428247 522 ntBASIC7.19□□□□□ -1.26
HLA-DOAP06340 MTATP6P17-201ENST00000431030 672 ntBASIC7.19□□□□□ -1.26
HLA-DOAP06340 RPL12P16-201ENST00000431098 498 ntBASIC7.19□□□□□ -1.26
HLA-DOAP06340 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.19□□□□□ -1.26
HLA-DOAP06340 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 AL512593.1-201ENST00000444758 779 ntBASIC7.19□□□□□ -1.26
HLA-DOAP06340 AL122020.1-201ENST00000472287 459 ntBASIC7.19□□□□□ -1.26
HLA-DOAP06340 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 PPIAP19-201ENST00000486414 492 ntBASIC7.19□□□□□ -1.26
HLA-DOAP06340 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 AL133372.1-201ENST00000493565 745 ntBASIC7.19□□□□□ -1.26
HLA-DOAP06340 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 AC025857.1-201ENST00000525252 377 ntBASIC7.19□□□□□ -1.26
HLA-DOAP06340 OR6M2P-201ENST00000529831 871 ntBASIC7.19□□□□□ -1.26
HLA-DOAP06340 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 AC079600.1-201ENST00000550326 297 ntBASIC7.19□□□□□ -1.26
HLA-DOAP06340 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 AC004223.2-201ENST00000590309 544 ntBASIC7.19□□□□□ -1.26
HLA-DOAP06340 CLIC4P2-201ENST00000601934 717 ntBASIC7.19□□□□□ -1.26
HLA-DOAP06340 AC103703.1-201ENST00000634783 663 ntBASIC7.19□□□□□ -1.26
HLA-DOAP06340 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 MIR4302-201ENST00000638058 60 ntBASIC7.19□□□□□ -1.26
HLA-DOAP06340 RFC1-217ENST00000639695 867 ntTSL 5 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HLA-DOAP06340 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
HLA-DOAP06340 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HLA-DOAP06340 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.19□□□□□ -1.26
HLA-DOAP06340 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HLA-DOAP06340 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
HLA-DOAP06340 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-DOAP06340 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
HLA-DOAP06340 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-DOAP06340 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
HLA-DOAP06340 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-DOAP06340 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.18□□□□□ -1.26
HLA-DOAP06340 CDY5P-201ENST00000411487 1580 ntBASIC7.18□□□□□ -1.26
HLA-DOAP06340 CDY9P-201ENST00000451397 1580 ntBASIC7.18□□□□□ -1.26
HLA-DOAP06340 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
HLA-DOAP06340 RN7SKP69-201ENST00000365390 305 ntBASIC7.18□□□□□ -1.26
HLA-DOAP06340 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.18□□□□□ -1.26
HLA-DOAP06340 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-DOAP06340 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-DOAP06340 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.18□□□□□ -1.26
HLA-DOAP06340 PCBP2P1-201ENST00000437262 977 ntBASIC7.18□□□□□ -1.26
HLA-DOAP06340 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.18□□□□□ -1.26
HLA-DOAP06340 AL391987.1-201ENST00000441025 200 ntBASIC7.18□□□□□ -1.26
HLA-DOAP06340 AL355355.1-201ENST00000442900 793 ntBASIC7.18□□□□□ -1.26
HLA-DOAP06340 AL022237.1-201ENST00000446663 358 ntBASIC7.18□□□□□ -1.26
HLA-DOAP06340 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.18□□□□□ -1.26
HLA-DOAP06340 GEMIN2P1-201ENST00000454246 752 ntBASIC7.18□□□□□ -1.26
HLA-DOAP06340 MTND6P32-201ENST00000457611 483 ntBASIC7.18□□□□□ -1.26
HLA-DOAP06340 AC104629.1-201ENST00000494226 508 ntBASIC7.18□□□□□ -1.26
HLA-DOAP06340 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC7.18□□□□□ -1.26
HLA-DOAP06340 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.18□□□□□ -1.26
HLA-DOAP06340 ZNF322P1-201ENST00000568013 1209 ntBASIC7.18□□□□□ -1.26
HLA-DOAP06340 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.18□□□□□ -1.26
HLA-DOAP06340 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-DOAP06340 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC7.18□□□□□ -1.26
HLA-DOAP06340 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.18□□□□□ -1.26
HLA-DOAP06340 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.18□□□□□ -1.26
HLA-DOAP06340 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.18□□□□□ -1.26
HLA-DOAP06340 AL021368.3-201ENST00000607119 578 ntBASIC7.18□□□□□ -1.26
HLA-DOAP06340 MIR6729-201ENST00000618194 65 ntBASIC7.18□□□□□ -1.26
HLA-DOAP06340 AC109809.1-201ENST00000619665 545 ntBASIC7.18□□□□□ -1.26
HLA-DOAP06340 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.18□□□□□ -1.26
HLA-DOAP06340 AC116667.2-201ENST00000641075 823 ntBASIC7.18□□□□□ -1.26
HLA-DOAP06340 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.18□□□□□ -1.26
HLA-DOAP06340 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-DOAP06340 CCNT2P1-201ENST00000423082 1315 ntBASIC7.18□□□□□ -1.26
HLA-DOAP06340 AC233968.1-201ENST00000611212 1300 ntBASIC7.18□□□□□ -1.26
HLA-DOAP06340 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.18□□□□□ -1.26
HLA-DOAP06340 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-DOAP06340 AC011815.2-201ENST00000618230 2021 ntBASIC7.18□□□□□ -1.26
HLA-DOAP06340 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-DOAP06340 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-DOAP06340 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-DOAP06340 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.18□□□□□ -1.26
HLA-DOAP06340 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-DOAP06340 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-DOAP06340 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-DOAP06340 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms