Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.52□□□□□ -1.53
P04436 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.52□□□□□ -1.53
P04436 AL512593.1-201ENST00000444758 779 ntBASIC5.52□□□□□ -1.53
P04436 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
P04436 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.52□□□□□ -1.53
P04436 HLA-DPA3-207ENST00000454398 229 ntBASIC5.52□□□□□ -1.53
P04436 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.52□□□□□ -1.53
P04436 RPL17P2-201ENST00000491913 451 ntBASIC5.52□□□□□ -1.53
P04436 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.52□□□□□ -1.53
P04436 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.52□□□□□ -1.53
P04436 Y_RNA.667-201ENST00000516212 107 ntBASIC5.52□□□□□ -1.53
P04436 RNA5SP271-201ENST00000516700 88 ntBASIC5.52□□□□□ -1.53
P04436 TPM3P3-201ENST00000521343 354 ntBASIC5.52□□□□□ -1.53
P04436 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.52□□□□□ -1.53
P04436 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.52□□□□□ -1.53
P04436 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.52□□□□□ -1.53
P04436 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.52□□□□□ -1.53
P04436 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.52□□□□□ -1.53
P04436 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.52□□□□□ -1.53
P04436 AL137246.2-201ENST00000613439 662 ntBASIC5.52□□□□□ -1.53
P04436 AL357562.1-201ENST00000624911 609 ntBASIC5.52□□□□□ -1.53
P04436 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.52□□□□□ -1.53
P04436 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
P04436 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
P04436 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.52□□□□□ -1.53
P04436 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
P04436 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
P04436 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.52□□□□□ -1.53
P04436 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.52□□□□□ -1.53
P04436 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
P04436 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.52□□□□□ -1.53
P04436 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
P04436 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
P04436 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
P04436 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
P04436 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
P04436 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
P04436 OLMALINC-203ENST00000641087 3779 ntBASIC5.51□□□□□ -1.53
P04436 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
P04436 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
P04436 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
P04436 RNA5SP477-201ENST00000362639 119 ntBASIC5.51□□□□□ -1.53
P04436 RN7SKP15-201ENST00000364742 309 ntBASIC5.51□□□□□ -1.53
P04436 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.51□□□□□ -1.53
P04436 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
P04436 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
P04436 AC116036.1-201ENST00000412199 367 ntBASIC5.51□□□□□ -1.53
P04436 HMGA1P8-201ENST00000414130 321 ntBASIC5.51□□□□□ -1.53
P04436 AC017078.1-201ENST00000416146 368 ntBASIC5.51□□□□□ -1.53
P04436 RPS3P2-201ENST00000421346 701 ntBASIC5.51□□□□□ -1.53
P04436 NMD3P2-201ENST00000421815 761 ntBASIC5.51□□□□□ -1.53
P04436 AC007562.1-201ENST00000421819 517 ntBASIC5.51□□□□□ -1.53
P04436 IPPKP1-201ENST00000422501 768 ntBASIC5.51□□□□□ -1.53
P04436 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.51□□□□□ -1.53
P04436 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.51□□□□□ -1.53
P04436 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.51□□□□□ -1.53
P04436 AC023274.2-201ENST00000445264 521 ntBASIC5.51□□□□□ -1.53
P04436 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.51□□□□□ -1.53
P04436 AC023245.1-201ENST00000468501 517 ntBASIC5.51□□□□□ -1.53
P04436 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
P04436 AL122020.1-201ENST00000472287 459 ntBASIC5.51□□□□□ -1.53
P04436 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.51□□□□□ -1.53
P04436 RPL23AP40-201ENST00000487630 390 ntBASIC5.51□□□□□ -1.53
P04436 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.51□□□□□ -1.53
P04436 UGT2A3P7-201ENST00000510485 734 ntBASIC5.51□□□□□ -1.53
P04436 AC006499.4-201ENST00000510947 694 ntBASIC5.51□□□□□ -1.53
P04436 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.51□□□□□ -1.53
P04436 AC110056.1-201ENST00000525759 911 ntBASIC5.51□□□□□ -1.53
P04436 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
P04436 AP004609.2-201ENST00000532177 190 ntBASIC5.51□□□□□ -1.53
P04436 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.51□□□□□ -1.53
P04436 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.51□□□□□ -1.53
P04436 AC007494.1-201ENST00000562293 760 ntBASIC5.51□□□□□ -1.53
P04436 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.51□□□□□ -1.53
P04436 MIR4776-2-201ENST00000580204 80 ntBASIC5.51□□□□□ -1.53
P04436 AL136131.3-201ENST00000607600 188 ntBASIC5.51□□□□□ -1.53
P04436 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.51□□□□□ -1.53
P04436 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.51□□□□□ -1.53
P04436 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
P04436 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.51□□□□□ -1.53
P04436 AC093829.1-201ENST00000506662 1618 ntBASIC5.51□□□□□ -1.53
P04436 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.51□□□□□ -1.53
P04436 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.51□□□□□ -1.53
P04436 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
P04436 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.51□□□□□ -1.53
P04436 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
P04436 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.51□□□□□ -1.53
P04436 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
P04436 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
P04436 AF287957.1-201ENST00000607368 1595 ntBASIC5.5□□□□□ -1.53
P04436 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
P04436 OFD1P17-201ENST00000437639 3018 ntBASIC5.5□□□□□ -1.53
P04436 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
P04436 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
P04436 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
P04436 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
P04436 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
P04436 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
P04436 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.5□□□□□ -1.53
P04436 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms