Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL136097.3-201ENST00000611097 505 ntBASIC6.19□□□□□ -1.42
SMAD6O43541 AC096861.1-201ENST00000616652 240 ntBASIC6.19□□□□□ -1.42
SMAD6O43541 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.19□□□□□ -1.42
SMAD6O43541 AC096708.4-201ENST00000620563 552 ntBASIC6.19□□□□□ -1.42
SMAD6O43541 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.19□□□□□ -1.42
SMAD6O43541 AL136228.1-201ENST00000622221 319 ntBASIC6.19□□□□□ -1.42
SMAD6O43541 AL357562.1-201ENST00000624911 609 ntBASIC6.19□□□□□ -1.42
SMAD6O43541 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SMAD6O43541 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SMAD6O43541 DOCK11P1-201ENST00000553480 5932 ntBASIC6.19□□□□□ -1.42
SMAD6O43541 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SMAD6O43541 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SMAD6O43541 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
SMAD6O43541 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SMAD6O43541 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.19□□□□□ -1.42
SMAD6O43541 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.19□□□□□ -1.42
SMAD6O43541 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SMAD6O43541 AL359091.1-201ENST00000449048 1734 ntBASIC6.19□□□□□ -1.42
SMAD6O43541 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SMAD6O43541 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.18□□□□□ -1.42
SMAD6O43541 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SMAD6O43541 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.18□□□□□ -1.42
SMAD6O43541 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SMAD6O43541 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SMAD6O43541 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SMAD6O43541 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.18□□□□□ -1.42
SMAD6O43541 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SMAD6O43541 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SMAD6O43541 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SMAD6O43541 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SMAD6O43541 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SMAD6O43541 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SMAD6O43541 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.18□□□□□ -1.42
SMAD6O43541 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SMAD6O43541 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SMAD6O43541 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.18□□□□□ -1.42
SMAD6O43541 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SMAD6O43541 LYPLA1P3-201ENST00000402650 695 ntBASIC6.18□□□□□ -1.42
SMAD6O43541 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.18□□□□□ -1.42
SMAD6O43541 RPS15AP30-201ENST00000420976 390 ntBASIC6.18□□□□□ -1.42
SMAD6O43541 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.18□□□□□ -1.42
SMAD6O43541 AC144530.1-201ENST00000452862 555 ntBASIC6.18□□□□□ -1.42
SMAD6O43541 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.18□□□□□ -1.42
SMAD6O43541 AC112187.1-201ENST00000455837 479 ntBASIC6.18□□□□□ -1.42
SMAD6O43541 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.18□□□□□ -1.42
SMAD6O43541 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.18□□□□□ -1.42
SMAD6O43541 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.18□□□□□ -1.42
SMAD6O43541 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.18□□□□□ -1.42
SMAD6O43541 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.18□□□□□ -1.42
SMAD6O43541 OR5H7P-201ENST00000514084 930 ntBASIC6.18□□□□□ -1.42
SMAD6O43541 RNU6-1334P-201ENST00000516032 105 ntBASIC6.18□□□□□ -1.42
SMAD6O43541 AC021733.2-201ENST00000518830 497 ntBASIC6.18□□□□□ -1.42
SMAD6O43541 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC6.18□□□□□ -1.42
SMAD6O43541 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.18□□□□□ -1.42
SMAD6O43541 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.18□□□□□ -1.42
SMAD6O43541 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.18□□□□□ -1.42
SMAD6O43541 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.18□□□□□ -1.42
SMAD6O43541 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.18□□□□□ -1.42
SMAD6O43541 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.18□□□□□ -1.42
SMAD6O43541 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.18□□□□□ -1.42
SMAD6O43541 AC125494.2-201ENST00000602431 657 ntBASIC6.18□□□□□ -1.42
SMAD6O43541 AC067773.1-201ENST00000603284 1094 ntBASIC6.18□□□□□ -1.42
SMAD6O43541 AL133406.3-201ENST00000606817 541 ntBASIC6.18□□□□□ -1.42
SMAD6O43541 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SMAD6O43541 AC116667.2-201ENST00000641075 823 ntBASIC6.18□□□□□ -1.42
SMAD6O43541 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SMAD6O43541 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SMAD6O43541 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SMAD6O43541 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SMAD6O43541 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SMAD6O43541 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.18□□□□□ -1.42
SMAD6O43541 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SMAD6O43541 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SMAD6O43541 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SMAD6O43541 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SMAD6O43541 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SMAD6O43541 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.18□□□□□ -1.42
SMAD6O43541 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SMAD6O43541 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SMAD6O43541 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SMAD6O43541 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
SMAD6O43541 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.17□□□□□ -1.42
SMAD6O43541 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SMAD6O43541 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.17□□□□□ -1.42
SMAD6O43541 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SMAD6O43541 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SMAD6O43541 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SMAD6O43541 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SMAD6O43541 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SMAD6O43541 AL589826.1-201ENST00000340697 249 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 RNA5SP273-201ENST00000362484 113 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 RNA5SP477-201ENST00000362639 119 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 RNU105B-201ENST00000364478 208 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.17□□□□□ -1.42
SMAD6O43541 AL354890.1-201ENST00000413730 346 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SMAD6O43541 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.17□□□□□ -1.42
SMAD6O43541 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.17□□□□□ -1.42
SMAD6O43541 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms