Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC093635.1-201ENST00000609028 555 ntBASIC5.84□□□□□ -1.47
PDLIM1O00151 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.84□□□□□ -1.47
PDLIM1O00151 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.84□□□□□ -1.47
PDLIM1O00151 OR7E91P-202ENST00000642062 1198 ntBASIC5.84□□□□□ -1.47
PDLIM1O00151 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.84□□□□□ -1.47
PDLIM1O00151 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.84□□□□□ -1.47
PDLIM1O00151 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.84□□□□□ -1.48
PDLIM1O00151 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PDLIM1O00151 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.84□□□□□ -1.48
PDLIM1O00151 PROS2P-201ENST00000474651 1951 ntBASIC5.84□□□□□ -1.48
PDLIM1O00151 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PDLIM1O00151 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.83□□□□□ -1.48
PDLIM1O00151 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM1O00151 BCORP1-203ENST00000513194 5093 ntBASIC5.83□□□□□ -1.48
PDLIM1O00151 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
PDLIM1O00151 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM1O00151 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM1O00151 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.83□□□□□ -1.48
PDLIM1O00151 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM1O00151 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PDLIM1O00151 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM1O00151 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.83□□□□□ -1.48
PDLIM1O00151 MRPS6P2-201ENST00000381143 370 ntBASIC5.83□□□□□ -1.48
PDLIM1O00151 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM1O00151 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.83□□□□□ -1.48
PDLIM1O00151 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.83□□□□□ -1.48
PDLIM1O00151 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.83□□□□□ -1.48
PDLIM1O00151 Z82198.3-201ENST00000421145 199 ntBASIC5.83□□□□□ -1.48
PDLIM1O00151 AC138761.5-201ENST00000433967 325 ntBASIC5.83□□□□□ -1.48
PDLIM1O00151 RPS3AP38-201ENST00000435889 763 ntBASIC5.83□□□□□ -1.48
PDLIM1O00151 RPEP4-201ENST00000437636 602 ntBASIC5.83□□□□□ -1.48
PDLIM1O00151 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.83□□□□□ -1.48
PDLIM1O00151 AL031681.1-201ENST00000443304 400 ntBASIC5.83□□□□□ -1.48
PDLIM1O00151 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.83□□□□□ -1.48
PDLIM1O00151 CCNJP1-201ENST00000450600 1149 ntBASIC5.83□□□□□ -1.48
PDLIM1O00151 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.83□□□□□ -1.48
PDLIM1O00151 RN7SL836P-201ENST00000476140 296 ntBASIC5.83□□□□□ -1.48
PDLIM1O00151 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM1O00151 AC131392.1-201ENST00000506490 633 ntBASIC5.83□□□□□ -1.48
PDLIM1O00151 AC093870.1-201ENST00000506837 213 ntBASIC5.83□□□□□ -1.48
PDLIM1O00151 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.83□□□□□ -1.48
PDLIM1O00151 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM1O00151 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.83□□□□□ -1.48
PDLIM1O00151 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.83□□□□□ -1.48
PDLIM1O00151 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.83□□□□□ -1.48
PDLIM1O00151 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.83□□□□□ -1.48
PDLIM1O00151 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.83□□□□□ -1.48
PDLIM1O00151 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.83□□□□□ -1.48
PDLIM1O00151 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.83□□□□□ -1.48
PDLIM1O00151 NPIPB1P-202ENST00000588786 828 ntBASIC5.83□□□□□ -1.48
PDLIM1O00151 AC012175.1-201ENST00000603755 531 ntBASIC5.83□□□□□ -1.48
PDLIM1O00151 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.83□□□□□ -1.48
PDLIM1O00151 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.83□□□□□ -1.48
PDLIM1O00151 SNORD96A-201ENST00000606577 79 ntBASIC5.83□□□□□ -1.48
PDLIM1O00151 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.83□□□□□ -1.48
PDLIM1O00151 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.83□□□□□ -1.48
PDLIM1O00151 MIR6503-201ENST00000622884 86 ntBASIC5.83□□□□□ -1.48
PDLIM1O00151 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.83□□□□□ -1.48
PDLIM1O00151 AC009950.2-201ENST00000636548 183 ntBASIC5.83□□□□□ -1.48
PDLIM1O00151 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.83□□□□□ -1.48
PDLIM1O00151 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM1O00151 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.83□□□□□ -1.48
PDLIM1O00151 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PDLIM1O00151 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM1O00151 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
PDLIM1O00151 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM1O00151 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM1O00151 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM1O00151 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM1O00151 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM1O00151 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.82□□□□□ -1.48
PDLIM1O00151 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
PDLIM1O00151 SOCS5P3-201ENST00000425115 1576 ntBASIC5.82□□□□□ -1.48
PDLIM1O00151 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM1O00151 U3.52-201ENST00000384034 216 ntBASIC5.82□□□□□ -1.48
PDLIM1O00151 RN7SKP279-201ENST00000411383 298 ntBASIC5.82□□□□□ -1.48
PDLIM1O00151 SMC4P1-201ENST00000414479 527 ntBASIC5.82□□□□□ -1.48
PDLIM1O00151 OR6C64P-201ENST00000419708 825 ntBASIC5.82□□□□□ -1.48
PDLIM1O00151 AL731534.1-201ENST00000434711 269 ntBASIC5.82□□□□□ -1.48
PDLIM1O00151 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.82□□□□□ -1.48
PDLIM1O00151 RARRES2P3-201ENST00000457739 473 ntBASIC5.82□□□□□ -1.48
PDLIM1O00151 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM1O00151 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM1O00151 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM1O00151 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.82□□□□□ -1.48
PDLIM1O00151 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.82□□□□□ -1.48
PDLIM1O00151 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.82□□□□□ -1.48
PDLIM1O00151 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.82□□□□□ -1.48
PDLIM1O00151 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.82□□□□□ -1.48
PDLIM1O00151 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.82□□□□□ -1.48
PDLIM1O00151 AC007342.5-201ENST00000571340 2142 ntBASIC5.82□□□□□ -1.48
PDLIM1O00151 RN7SL66P-201ENST00000582099 264 ntBASIC5.82□□□□□ -1.48
PDLIM1O00151 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM1O00151 AC068726.1-201ENST00000610993 341 ntBASIC5.82□□□□□ -1.48
PDLIM1O00151 AC068213.1-201ENST00000625124 226 ntBASIC5.82□□□□□ -1.48
PDLIM1O00151 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.82□□□□□ -1.48
PDLIM1O00151 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM1O00151 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM1O00151 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.82□□□□□ -1.48
PDLIM1O00151 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms