Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RNY4P36-201ENST00000391116 96 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 RPL7P58-201ENST00000402913 758 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 Z97987.1-202ENST00000411708 391 ntTSL 3 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AL450311.1-201ENST00000434931 576 ntTSL 4 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AC007237.1-201ENST00000442074 499 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AL392103.1-201ENST00000447000 198 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 OR7E102P-201ENST00000448855 1015 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AL157714.1-201ENST00000448964 625 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AL133387.3-201ENST00000450669 522 ntTSL 5 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 LINC02037-201ENST00000455821 1195 ntTSL 5 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 RNU7-152P-201ENST00000458982 64 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 PSAT1P4-201ENST00000466500 526 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 TUBB3P2-201ENST00000480063 232 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AC023194.1-201ENST00000493084 308 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 SUMO2P7-201ENST00000511179 285 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 RNU4-49P-201ENST00000516080 140 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AC009812.2-201ENST00000517657 457 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 LINC00967-202ENST00000517725 259 ntTSL 2 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 NRBF2P4-201ENST00000520874 850 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AC079031.2-201ENST00000537742 615 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AC006927.1-201ENST00000544818 498 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AC018554.2-201ENST00000563482 261 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AC126773.1-201ENST00000569654 547 ntTSL 4 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 RN7SL155P-201ENST00000581538 263 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AC090213.1-201ENST00000586841 546 ntTSL 4 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AC090950.1-201ENST00000604625 830 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AC004890.3-201ENST00000605566 1095 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 FRG1HP-203ENST00000615326 593 ntTSL 3 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 RMST_5.1-201ENST00000618704 126 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 KCNQ1OT1_2.1-201ENST00000619507 196 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 OR1N1-202ENST00000619659 939 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AC099494.2-201ENST00000623371 978 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AC231657.1-201ENST00000624313 397 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 PAQR5-205ENST00000561153 2347 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AC007638.2-201ENST00000574716 1740 ntTSL 2 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 AC012467.2-201ENST00000607783 2583 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 ERCC6-208ENST00000515869 3439 ntTSL 2 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 ATP5BP1-201ENST00000411980 1574 ntBASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 PRSS54-202ENST00000543437 1555 ntTSL 2 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC8.48□□□□□ -1.05
VPS9D1Q9Y2B5 ZNF728-201ENST00000594710 2015 ntAPPRIS P1 TSL 3 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 LCLAT1-201ENST00000309052 5060 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 MIR4458HG-203ENST00000606459 3239 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 RBMS2-204ENST00000550726 1452 ntTSL 2 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 PRYP4-201ENST00000306589 444 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 Y_RNA.489-201ENST00000384410 101 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 DNAJA1P4-201ENST00000406473 1166 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 RPS23P8-201ENST00000429775 330 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 LINC01865-201ENST00000430529 845 ntTSL 3 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 RPL32P28-201ENST00000443577 397 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 FO393419.1-201ENST00000443746 355 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 H2AFZP6-201ENST00000444403 394 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 FAR2P3-205ENST00000447059 604 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 OR51P1P-201ENST00000447547 942 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 AC002075.1-201ENST00000457396 676 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 RNU6-329P-201ENST00000459618 107 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 AC091564.1-201ENST00000464563 479 ntBASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 506 ms