Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 RN7SL447P-201ENST00000494711 245 ntBASIC5.94□□□□□ -1.46
CHD7Q9P2D1 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 RN7SKP288-201ENST00000516227 268 ntBASIC5.94□□□□□ -1.46
CHD7Q9P2D1 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 AC069307.1-201ENST00000602820 447 ntBASIC5.94□□□□□ -1.46
CHD7Q9P2D1 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 CYP4F35P-202ENST00000636121 390 ntBASIC5.94□□□□□ -1.46
CHD7Q9P2D1 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 EPS15P1-202ENST00000459691 2071 ntBASIC5.94□□□□□ -1.46
CHD7Q9P2D1 PDP2-201ENST00000311765 7146 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 ZNF101P1-201ENST00000435701 1720 ntBASIC5.94□□□□□ -1.46
CHD7Q9P2D1 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 RNU1-43P-201ENST00000365052 165 ntBASIC5.94□□□□□ -1.46
CHD7Q9P2D1 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 RPL23AP40-201ENST00000487630 390 ntBASIC5.94□□□□□ -1.46
CHD7Q9P2D1 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 AL353662.3-201ENST00000625131 237 ntBASIC5.94□□□□□ -1.46
CHD7Q9P2D1 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 AC130304.1-201ENST00000622942 2385 ntBASIC5.94□□□□□ -1.46
CHD7Q9P2D1 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 AL133482.1-201ENST00000415988 498 ntBASIC5.94□□□□□ -1.46
CHD7Q9P2D1 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD7Q9P2D1 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 AP004607.3-201ENST00000530354 3915 ntBASIC5.93□□□□□ -1.46
CHD7Q9P2D1 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 AC114947.2-201ENST00000565748 2125 ntBASIC5.93□□□□□ -1.46
CHD7Q9P2D1 AL356317.1-201ENST00000396110 1436 ntBASIC5.93□□□□□ -1.46
CHD7Q9P2D1 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 AL161722.1-201ENST00000446972 1032 ntBASIC5.93□□□□□ -1.46
CHD7Q9P2D1 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 AC078878.1-201ENST00000539832 958 ntBASIC5.93□□□□□ -1.46
CHD7Q9P2D1 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 MIR133B-201ENST00000362210 119 ntBASIC5.93□□□□□ -1.46
CHD7Q9P2D1 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 AC021074.2-201ENST00000468434 172 ntBASIC5.93□□□□□ -1.46
CHD7Q9P2D1 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.93□□□□□ -1.46
CHD7Q9P2D1 AC104687.2-201ENST00000604442 342 ntBASIC5.93□□□□□ -1.46
CHD7Q9P2D1 AC116631.1-202ENST00000640984 683 ntBASIC5.93□□□□□ -1.46
CHD7Q9P2D1 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 NRP1-206ENST00000374867 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHD7Q9P2D1 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CHD7Q9P2D1 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
CHD7Q9P2D1 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CHD7Q9P2D1 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC5.92□□□□□ -1.46
CHD7Q9P2D1 TBC1D15-217ENST00000550746 6184 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CHD7Q9P2D1 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CHD7Q9P2D1 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CHD7Q9P2D1 SNORA67-201ENST00000384423 137 ntBASIC5.92□□□□□ -1.46
CHD7Q9P2D1 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.92□□□□□ -1.46
CHD7Q9P2D1 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.92□□□□□ -1.46
CHD7Q9P2D1 BTF3P13-201ENST00000513224 490 ntBASIC5.92□□□□□ -1.46
CHD7Q9P2D1 AC134698.5-201ENST00000519444 336 ntBASIC5.92□□□□□ -1.46
CHD7Q9P2D1 IGHV1-14-201ENST00000523391 241 ntBASIC5.92□□□□□ -1.46
CHD7Q9P2D1 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.92□□□□□ -1.46
CHD7Q9P2D1 AC007494.1-201ENST00000562293 760 ntBASIC5.92□□□□□ -1.46
CHD7Q9P2D1 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.92□□□□□ -1.46
CHD7Q9P2D1 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.92□□□□□ -1.46
CHD7Q9P2D1 AC090527.3-201ENST00000619041 548 ntBASIC5.92□□□□□ -1.46
CHD7Q9P2D1 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHD7Q9P2D1 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms