Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 RNA5SP110-201ENST00000362638 115 ntBASIC5.6□□□□□ -1.51
VAPAQ9P0L0 SNORA64.3-201ENST00000365647 134 ntBASIC5.6□□□□□ -1.51
VAPAQ9P0L0 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 U3.23-201ENST00000391132 200 ntBASIC5.6□□□□□ -1.51
VAPAQ9P0L0 AL139805.1-201ENST00000407837 289 ntBASIC5.6□□□□□ -1.51
VAPAQ9P0L0 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 RNA5SP231-201ENST00000410496 138 ntBASIC5.6□□□□□ -1.51
VAPAQ9P0L0 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 RPL12P12-201ENST00000424633 501 ntBASIC5.6□□□□□ -1.51
VAPAQ9P0L0 CRIP1P1-201ENST00000427567 185 ntBASIC5.6□□□□□ -1.51
VAPAQ9P0L0 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 PSMD8P1-201ENST00000436275 769 ntBASIC5.6□□□□□ -1.51
VAPAQ9P0L0 AC010086.1-201ENST00000437359 1052 ntBASIC5.6□□□□□ -1.51
VAPAQ9P0L0 RPS12P17-201ENST00000438591 377 ntBASIC5.6□□□□□ -1.51
VAPAQ9P0L0 AL663074.2-201ENST00000440621 479 ntBASIC5.6□□□□□ -1.51
VAPAQ9P0L0 AC092601.1-201ENST00000444526 383 ntBASIC5.6□□□□□ -1.51
VAPAQ9P0L0 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 AC093325.1-201ENST00000508378 326 ntBASIC5.6□□□□□ -1.51
VAPAQ9P0L0 MIR2117-201ENST00000516780 80 ntBASIC5.6□□□□□ -1.51
VAPAQ9P0L0 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 BMS1P16-201ENST00000556075 1147 ntBASIC5.6□□□□□ -1.51
VAPAQ9P0L0 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 AL163952.1-202ENST00000569625 600 ntBASIC5.6□□□□□ -1.51
VAPAQ9P0L0 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 MIR6885-201ENST00000612241 66 ntBASIC5.6□□□□□ -1.51
VAPAQ9P0L0 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 AC079776.5-201ENST00000641920 211 ntBASIC5.6□□□□□ -1.51
VAPAQ9P0L0 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VAPAQ9P0L0 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VAPAQ9P0L0 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
VAPAQ9P0L0 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
VAPAQ9P0L0 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.59□□□□□ -1.51
VAPAQ9P0L0 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VAPAQ9P0L0 RBMY1HP-201ENST00000382759 1389 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 SNORA21-201ENST00000362423 132 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 RNA5SP453-201ENST00000362503 119 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VAPAQ9P0L0 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.59□□□□□ -1.51
VAPAQ9P0L0 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.59□□□□□ -1.51
VAPAQ9P0L0 RN7SKP108-201ENST00000411367 328 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 RN7SKP279-201ENST00000411383 298 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.59□□□□□ -1.51
VAPAQ9P0L0 DPPA2P2-201ENST00000418220 897 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 AC099677.3-201ENST00000427081 395 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.59□□□□□ -1.51
VAPAQ9P0L0 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.59□□□□□ -1.51
VAPAQ9P0L0 AC242426.1-201ENST00000435270 960 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 SEPT14P12-201ENST00000442280 560 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 AC002553.3-201ENST00000453002 341 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.59□□□□□ -1.51
VAPAQ9P0L0 Z83838.1-202ENST00000456225 839 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 RBMY2HP-201ENST00000457961 720 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 MTCO1P55-201ENST00000489829 745 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 AC083795.1-201ENST00000491760 320 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.59□□□□□ -1.51
VAPAQ9P0L0 SNX18P25-201ENST00000510539 758 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 AL121594.2-201ENST00000541658 472 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.59□□□□□ -1.51
VAPAQ9P0L0 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.59□□□□□ -1.51
VAPAQ9P0L0 ZNF322P1-201ENST00000568013 1209 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 MIR3157-201ENST00000578688 85 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.59□□□□□ -1.51
VAPAQ9P0L0 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.59□□□□□ -1.51
VAPAQ9P0L0 AL513327.3-201ENST00000602618 469 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 AC012368.3-201ENST00000604190 219 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 NDUFB9P1-201ENST00000604683 510 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 RFPL4AP6-201ENST00000616792 846 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 AC096708.4-201ENST00000620563 552 ntBASIC5.59□□□□□ -1.51
VAPAQ9P0L0 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.59□□□□□ -1.51
VAPAQ9P0L0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.59□□□□□ -1.51
VAPAQ9P0L0 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VAPAQ9P0L0 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
VAPAQ9P0L0 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
VAPAQ9P0L0 AC022306.1-201ENST00000560489 1562 ntBASIC5.59□□□□□ -1.52
VAPAQ9P0L0 XKRY2-202ENST00000623874 1581 ntBASIC5.59□□□□□ -1.52
VAPAQ9P0L0 XKRY-202ENST00000624960 1581 ntBASIC5.59□□□□□ -1.52
VAPAQ9P0L0 PPBPP2-201ENST00000513150 1362 ntBASIC5.58□□□□□ -1.52
VAPAQ9P0L0 AC239868.2-201ENST00000564237 4527 ntBASIC5.58□□□□□ -1.52
VAPAQ9P0L0 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 NPM1P37-201ENST00000403105 874 ntBASIC5.58□□□□□ -1.52
VAPAQ9P0L0 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms