Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 RN7SL475P-201ENST00000583379 298 ntBASIC4.71□□□□□ -1.66
VGLL1Q99990 GLYATL1P2-202ENST00000588046 902 ntBASIC4.71□□□□□ -1.66
VGLL1Q99990 NPIPB1P-202ENST00000588786 828 ntBASIC4.71□□□□□ -1.66
VGLL1Q99990 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.71□□□□□ -1.66
VGLL1Q99990 AC012175.1-201ENST00000603755 531 ntBASIC4.71□□□□□ -1.66
VGLL1Q99990 AL512506.1-201ENST00000613918 449 ntBASIC4.71□□□□□ -1.66
VGLL1Q99990 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VGLL1Q99990 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC4.71□□□□□ -1.66
VGLL1Q99990 AC009452.1-201ENST00000640823 606 ntBASIC4.71□□□□□ -1.66
VGLL1Q99990 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
VGLL1Q99990 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VGLL1Q99990 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.71□□□□□ -1.66
VGLL1Q99990 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
VGLL1Q99990 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VGLL1Q99990 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VGLL1Q99990 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
VGLL1Q99990 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VGLL1Q99990 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.71□□□□□ -1.66
VGLL1Q99990 OR51C1P-202ENST00000641159 1444 ntBASIC4.71□□□□□ -1.66
VGLL1Q99990 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.71□□□□□ -1.66
VGLL1Q99990 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC4.71□□□□□ -1.66
VGLL1Q99990 AC009220.2-201ENST00000489759 1751 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VGLL1Q99990 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC4.7□□□□□ -1.66
VGLL1Q99990 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
VGLL1Q99990 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VGLL1Q99990 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
VGLL1Q99990 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.7□□□□□ -1.66
VGLL1Q99990 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VGLL1Q99990 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC4.7□□□□□ -1.66
VGLL1Q99990 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
VGLL1Q99990 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VGLL1Q99990 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
VGLL1Q99990 RNA5-8SP5-201ENST00000365304 152 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
VGLL1Q99990 CDC42P6-201ENST00000421246 576 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC4.7□□□□□ -1.66
VGLL1Q99990 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC4.7□□□□□ -1.66
VGLL1Q99990 PTPN2P1-201ENST00000423212 1072 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.7□□□□□ -1.66
VGLL1Q99990 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC4.7□□□□□ -1.66
VGLL1Q99990 CR848007.2-201ENST00000424918 787 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 AL589794.1-201ENST00000424971 390 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 AC092646.1-201ENST00000427142 901 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 AC083862.1-201ENST00000427378 1242 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 BMS1P11-201ENST00000442351 885 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC4.7□□□□□ -1.66
VGLL1Q99990 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC4.7□□□□□ -1.66
VGLL1Q99990 BMS1P9-201ENST00000457640 885 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 RN7SL372P-201ENST00000461982 298 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 RN7SL714P-201ENST00000487050 298 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC4.7□□□□□ -1.66
VGLL1Q99990 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.7□□□□□ -1.66
VGLL1Q99990 AC008945.1-201ENST00000505144 499 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 AC010343.2-201ENST00000510162 224 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC4.7□□□□□ -1.66
VGLL1Q99990 NPM1P21-201ENST00000513394 762 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC4.7□□□□□ -1.66
VGLL1Q99990 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC4.7□□□□□ -1.66
VGLL1Q99990 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC4.7□□□□□ -1.66
VGLL1Q99990 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC4.7□□□□□ -1.66
VGLL1Q99990 AC023968.1-201ENST00000560719 475 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC4.7□□□□□ -1.66
VGLL1Q99990 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.7□□□□□ -1.66
VGLL1Q99990 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.7□□□□□ -1.66
VGLL1Q99990 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC4.7□□□□□ -1.66
VGLL1Q99990 AC090330.1-201ENST00000588646 764 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC4.7□□□□□ -1.66
VGLL1Q99990 AC010487.1-201ENST00000594408 1172 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC4.7□□□□□ -1.66
VGLL1Q99990 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC4.7□□□□□ -1.66
VGLL1Q99990 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC4.7□□□□□ -1.66
VGLL1Q99990 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.7□□□□□ -1.66
VGLL1Q99990 AC009032.1-201ENST00000617574 431 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 MIR7159-201ENST00000620587 66 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 AC007204.1-201ENST00000621794 555 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 AC020763.5-201ENST00000623298 430 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
VGLL1Q99990 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC4.7□□□□□ -1.66
VGLL1Q99990 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
VGLL1Q99990 AC000095.2-202ENST00000637415 154 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 OR7E91P-202ENST00000642062 1198 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VGLL1Q99990 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VGLL1Q99990 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VGLL1Q99990 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
VGLL1Q99990 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VGLL1Q99990 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VGLL1Q99990 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC4.7□□□□□ -1.66
VGLL1Q99990 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VGLL1Q99990 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
VGLL1Q99990 AC004158.1-201ENST00000564508 4319 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 SMG1P5-202ENST00000529428 4219 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 SMG1P2-201ENST00000566127 4221 ntBASIC4.7□□□□□ -1.66
VGLL1Q99990 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
VGLL1Q99990 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VGLL1Q99990 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
VGLL1Q99990 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VGLL1Q99990 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC4.69□□□□□ -1.66
VGLL1Q99990 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms