Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 HMGB3P19-201ENST00000403971 560 ntBASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 RNU4-27P-201ENST00000410889 139 ntBASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 MTATP6P27-201ENST00000416987 621 ntBASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 FABP5P3-201ENST00000437960 408 ntBASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 AC092641.1-201ENST00000440229 772 ntBASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 MTND1P18-201ENST00000448191 573 ntBASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 PSMA6P2-201ENST00000457574 686 ntBASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 BZW1P2-201ENST00000473537 826 ntBASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 RPL21P131-201ENST00000497298 483 ntBASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 MYL12BP2-201ENST00000503948 512 ntBASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 CR383658.1-201ENST00000514609 734 ntBASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 AC010463.3-201ENST00000594077 500 ntBASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 AC093388.1-201ENST00000609166 430 ntBASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 AC100793.4-201ENST00000613683 429 ntBASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 AP005212.3-201ENST00000619964 528 ntBASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 RBM12B-AS1-201ENST00000623283 653 ntBASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 AC027279.4-201ENST00000624371 2072 ntBASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 COL6A4P1-202ENST00000487147 4317 ntBASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AC006042.3-201ENST00000454684 1469 ntBASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 HSPD1P9-201ENST00000420325 1636 ntBASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 FGF7P2-201ENST00000332473 296 ntBASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 RNU6-692P-201ENST00000384496 107 ntBASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AL593851.1-201ENST00000426171 157 ntBASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 RPS7P2-201ENST00000435134 607 ntBASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 HMGB1P26-201ENST00000452520 628 ntBASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AC063955.1-201ENST00000462872 685 ntBASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 STRADBP1-201ENST00000478954 1281 ntBASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AC096743.1-201ENST00000485172 319 ntBASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 NIPA2P2-201ENST00000496376 1083 ntBASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 CDC42P4-201ENST00000510507 563 ntBASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AC074344.1-201ENST00000512823 224 ntBASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AL139174.1-201ENST00000531489 886 ntBASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AC007537.1-201ENST00000539347 327 ntBASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AC089984.3-201ENST00000552838 363 ntBASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AC245505.1-201ENST00000556398 224 ntBASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC8.19□□□□□ -1.1
NEDD1Q8NHV4 AP000907.4-201ENST00000604143 237 ntBASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms