Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CTR9Q6PD62 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CTR9Q6PD62 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CTR9Q6PD62 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
CTR9Q6PD62 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.24□□□□□ -1.25
CTR9Q6PD62 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CTR9Q6PD62 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CTR9Q6PD62 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
CTR9Q6PD62 RNA5SP477-201ENST00000362639 119 ntBASIC7.24□□□□□ -1.25
CTR9Q6PD62 RNU105B-201ENST00000364478 208 ntBASIC7.24□□□□□ -1.25
CTR9Q6PD62 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
CTR9Q6PD62 LYPLA1P3-201ENST00000402650 695 ntBASIC7.24□□□□□ -1.25
CTR9Q6PD62 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.24□□□□□ -1.25
CTR9Q6PD62 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.24□□□□□ -1.25
CTR9Q6PD62 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CTR9Q6PD62 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.24□□□□□ -1.25
CTR9Q6PD62 TRIM60P16-201ENST00000444048 694 ntBASIC7.24□□□□□ -1.25
CTR9Q6PD62 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC7.24□□□□□ -1.25
CTR9Q6PD62 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.24□□□□□ -1.25
CTR9Q6PD62 CFL1P4-201ENST00000451536 498 ntBASIC7.24□□□□□ -1.25
CTR9Q6PD62 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CTR9Q6PD62 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.24□□□□□ -1.25
CTR9Q6PD62 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.24□□□□□ -1.25
CTR9Q6PD62 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CTR9Q6PD62 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.24□□□□□ -1.25
CTR9Q6PD62 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.24□□□□□ -1.25
CTR9Q6PD62 OR4H6P-201ENST00000563771 921 ntBASIC7.24□□□□□ -1.25
CTR9Q6PD62 OR7A8P-201ENST00000595427 913 ntBASIC7.24□□□□□ -1.25
CTR9Q6PD62 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.24□□□□□ -1.25
CTR9Q6PD62 AC096708.4-201ENST00000620563 552 ntBASIC7.24□□□□□ -1.25
CTR9Q6PD62 FO681491.1-202ENST00000623392 737 ntBASIC7.24□□□□□ -1.25
CTR9Q6PD62 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.24□□□□□ -1.25
CTR9Q6PD62 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CTR9Q6PD62 AP002512.4-202ENST00000641599 4530 ntBASIC7.24□□□□□ -1.25
CTR9Q6PD62 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
CTR9Q6PD62 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.24□□□□□ -1.25
CTR9Q6PD62 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CTR9Q6PD62 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CTR9Q6PD62 AP001157.1-201ENST00000550837 2339 ntBASIC7.23□□□□□ -1.25
CTR9Q6PD62 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CTR9Q6PD62 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
CTR9Q6PD62 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 AC090220.1-201ENST00000593078 1699 ntBASIC7.23□□□□□ -1.25
CTR9Q6PD62 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CTR9Q6PD62 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CTR9Q6PD62 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CTR9Q6PD62 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.23□□□□□ -1.25
CTR9Q6PD62 RPS7P8-201ENST00000418311 581 ntBASIC7.23□□□□□ -1.25
CTR9Q6PD62 SETP9-201ENST00000423837 832 ntBASIC7.23□□□□□ -1.25
CTR9Q6PD62 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 AC005077.1-201ENST00000449226 375 ntBASIC7.23□□□□□ -1.25
CTR9Q6PD62 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 AC026782.2-201ENST00000510845 636 ntBASIC7.23□□□□□ -1.25
CTR9Q6PD62 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 OR4A40P-201ENST00000533878 948 ntBASIC7.23□□□□□ -1.25
CTR9Q6PD62 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 MIR4310-201ENST00000582950 57 ntBASIC7.23□□□□□ -1.25
CTR9Q6PD62 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 AC015982.1-201ENST00000608113 465 ntBASIC7.23□□□□□ -1.25
CTR9Q6PD62 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 AC245014.3-201ENST00000618589 347 ntBASIC7.23□□□□□ -1.25
CTR9Q6PD62 AL162377.2-201ENST00000624532 337 ntBASIC7.23□□□□□ -1.25
CTR9Q6PD62 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 AC116667.2-201ENST00000641075 823 ntBASIC7.23□□□□□ -1.25
CTR9Q6PD62 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CTR9Q6PD62 AC093671.1-201ENST00000624981 2929 ntBASIC7.23□□□□□ -1.25
CTR9Q6PD62 AC092724.1-201ENST00000624623 3397 ntBASIC7.23□□□□□ -1.25
CTR9Q6PD62 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CTR9Q6PD62 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.23□□□□□ -1.25
CTR9Q6PD62 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTR9Q6PD62 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CTR9Q6PD62 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CTR9Q6PD62 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTR9Q6PD62 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTR9Q6PD62 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.22□□□□□ -1.25
CTR9Q6PD62 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTR9Q6PD62 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTR9Q6PD62 AC010329.1-201ENST00000593903 8328 ntBASIC7.22□□□□□ -1.25
CTR9Q6PD62 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
CTR9Q6PD62 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTR9Q6PD62 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CTR9Q6PD62 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.22□□□□□ -1.25
CTR9Q6PD62 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTR9Q6PD62 SNORD8-201ENST00000363915 110 ntBASIC7.22□□□□□ -1.25
CTR9Q6PD62 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTR9Q6PD62 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms