Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC4.1□□□□□ -1.75
RPL39P62891 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.1□□□□□ -1.75
RPL39P62891 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.1□□□□□ -1.75
RPL39P62891 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC4.1□□□□□ -1.75
RPL39P62891 AC023310.2-201ENST00000553844 547 ntBASIC4.1□□□□□ -1.75
RPL39P62891 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.1□□□□□ -1.75
RPL39P62891 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.1□□□□□ -1.75
RPL39P62891 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
RPL39P62891 AL589765.6-201ENST00000601909 549 ntBASIC4.1□□□□□ -1.75
RPL39P62891 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC4.1□□□□□ -1.75
RPL39P62891 MIR6726-201ENST00000613751 61 ntBASIC4.1□□□□□ -1.75
RPL39P62891 AC068213.1-201ENST00000625124 226 ntBASIC4.1□□□□□ -1.75
RPL39P62891 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.1□□□□□ -1.75
RPL39P62891 MFSD8-219ENST00000641228 2559 ntBASIC4.1□□□□□ -1.75
RPL39P62891 AC007938.2-201ENST00000604666 2634 ntBASIC4.1□□□□□ -1.75
RPL39P62891 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
RPL39P62891 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.1□□□□□ -1.75
RPL39P62891 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.1□□□□□ -1.75
RPL39P62891 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RPL39P62891 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
RPL39P62891 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RPL39P62891 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
RPL39P62891 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
RPL39P62891 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC4.09□□□□□ -1.75
RPL39P62891 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RPL39P62891 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RPL39P62891 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RPL39P62891 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
RPL39P62891 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RPL39P62891 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
RPL39P62891 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RPL39P62891 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.09□□□□□ -1.75
RPL39P62891 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.09□□□□□ -1.75
RPL39P62891 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RPL39P62891 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RPL39P62891 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
RPL39P62891 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RPL39P62891 RNA5SP85-201ENST00000365378 119 ntBASIC4.09□□□□□ -1.75
RPL39P62891 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
RPL39P62891 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.09□□□□□ -1.75
RPL39P62891 RNA5SP187-201ENST00000384400 119 ntBASIC4.09□□□□□ -1.75
RPL39P62891 YWHAZP4-201ENST00000392459 708 ntBASIC4.09□□□□□ -1.75
RPL39P62891 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RPL39P62891 MRPL32P1-201ENST00000406301 247 ntBASIC4.09□□□□□ -1.75
RPL39P62891 AL133482.1-201ENST00000415988 498 ntBASIC4.09□□□□□ -1.75
RPL39P62891 RPL35AP31-201ENST00000418340 337 ntBASIC4.09□□□□□ -1.75
RPL39P62891 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC4.09□□□□□ -1.75
RPL39P62891 FTO-202ENST00000431610 707 ntTSL 3 BASIC4.09□□□□□ -1.75
RPL39P62891 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC4.09□□□□□ -1.75
RPL39P62891 SLC25A24P1-202ENST00000434803 1220 ntBASIC4.09□□□□□ -1.75
RPL39P62891 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.09□□□□□ -1.75
RPL39P62891 RPS12P17-201ENST00000438591 377 ntBASIC4.09□□□□□ -1.75
RPL39P62891 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC4.09□□□□□ -1.75
RPL39P62891 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.09□□□□□ -1.75
RPL39P62891 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.09□□□□□ -1.75
RPL39P62891 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC4.09□□□□□ -1.75
RPL39P62891 AC021146.10-201ENST00000515628 706 ntBASIC4.09□□□□□ -1.75
RPL39P62891 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC4.09□□□□□ -1.75
RPL39P62891 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.09□□□□□ -1.75
RPL39P62891 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
RPL39P62891 OR4A42P-201ENST00000531397 938 ntBASIC4.09□□□□□ -1.75
RPL39P62891 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.09□□□□□ -1.75
RPL39P62891 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.09□□□□□ -1.75
RPL39P62891 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.09□□□□□ -1.75
RPL39P62891 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.09□□□□□ -1.75
RPL39P62891 GARSP1-201ENST00000570895 719 ntBASIC4.09□□□□□ -1.75
RPL39P62891 AC006120.1-201ENST00000579375 546 ntBASIC4.09□□□□□ -1.75
RPL39P62891 MIR378H-201ENST00000579966 83 ntBASIC4.09□□□□□ -1.75
RPL39P62891 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC4.09□□□□□ -1.75
RPL39P62891 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC4.09□□□□□ -1.75
RPL39P62891 FXYD6P1-201ENST00000604857 285 ntBASIC4.09□□□□□ -1.75
RPL39P62891 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.09□□□□□ -1.75
RPL39P62891 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC4.09□□□□□ -1.75
RPL39P62891 AL645933.2-201ENST00000606743 1207 ntBASIC4.09□□□□□ -1.75
RPL39P62891 AL022394.1-201ENST00000606979 292 ntBASIC4.09□□□□□ -1.75
RPL39P62891 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.09□□□□□ -1.75
RPL39P62891 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC4.09□□□□□ -1.75
RPL39P62891 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC4.09□□□□□ -1.75
RPL39P62891 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.09□□□□□ -1.75
RPL39P62891 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RPL39P62891 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RPL39P62891 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.09□□□□□ -1.75
RPL39P62891 UGT2B24P-201ENST00000514441 1597 ntBASIC4.09□□□□□ -1.75
RPL39P62891 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
RPL39P62891 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RPL39P62891 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.09□□□□□ -1.76
RPL39P62891 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RPL39P62891 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RPL39P62891 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RPL39P62891 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RPL39P62891 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.09□□□□□ -1.76
RPL39P62891 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
RPL39P62891 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RPL39P62891 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.09□□□□□ -1.76
RPL39P62891 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RPL39P62891 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RPL39P62891 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.09□□□□□ -1.76
RPL39P62891 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
RPL39P62891 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RPL39P62891 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms