Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AL590806.1-201ENST00000415818 853 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.01□□□□□ -1.45
SUMO3P55854 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.01□□□□□ -1.45
SUMO3P55854 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.01□□□□□ -1.45
SUMO3P55854 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6.01□□□□□ -1.45
SUMO3P55854 DEFB130D-201ENST00000426866 237 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.01□□□□□ -1.45
SUMO3P55854 AC003989.1-201ENST00000434569 565 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 ARF4P4-201ENST00000439608 520 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.01□□□□□ -1.45
SUMO3P55854 GAPDHP33-201ENST00000443168 1013 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.01□□□□□ -1.45
SUMO3P55854 AC069540.1-201ENST00000446320 988 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.01□□□□□ -1.45
SUMO3P55854 AKR1D1P1-201ENST00000457236 936 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 RPL5P12-201ENST00000477071 851 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 RPS4XP17-201ENST00000479057 754 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.01□□□□□ -1.45
SUMO3P55854 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.01□□□□□ -1.45
SUMO3P55854 AC009567.2-201ENST00000502989 349 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 AC114324.2-202ENST00000503812 134 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 AC025459.1-201ENST00000504072 156 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.01□□□□□ -1.45
SUMO3P55854 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.01□□□□□ -1.45
SUMO3P55854 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SUMO3P55854 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.01□□□□□ -1.45
SUMO3P55854 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.01□□□□□ -1.45
SUMO3P55854 RNA5SP96-201ENST00000516041 107 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 RN7SKP98-201ENST00000517070 156 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 IGHV3-63-201ENST00000518422 341 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.01□□□□□ -1.45
SUMO3P55854 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.01□□□□□ -1.45
SUMO3P55854 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC6.01□□□□□ -1.45
SUMO3P55854 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC6.01□□□□□ -1.45
SUMO3P55854 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.01□□□□□ -1.45
SUMO3P55854 OR4C49P-201ENST00000563891 900 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.01□□□□□ -1.45
SUMO3P55854 MIR4509-3-201ENST00000578671 94 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 MIR4509-2-201ENST00000583920 94 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.01□□□□□ -1.45
SUMO3P55854 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.01□□□□□ -1.45
SUMO3P55854 AL157899.1-201ENST00000604110 936 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 AL359513.1-201ENST00000614364 557 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 MIR4509-1-201ENST00000618224 94 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 AC109809.1-201ENST00000619665 545 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.01□□□□□ -1.45
SUMO3P55854 AC107021.2-201ENST00000567714 2095 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SUMO3P55854 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.01□□□□□ -1.45
SUMO3P55854 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SUMO3P55854 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.01□□□□□ -1.45
SUMO3P55854 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SUMO3P55854 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.01□□□□□ -1.45
SUMO3P55854 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SUMO3P55854 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SUMO3P55854 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6□□□□□ -1.45
SUMO3P55854 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6□□□□□ -1.45
SUMO3P55854 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SUMO3P55854 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
SUMO3P55854 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6□□□□□ -1.45
SUMO3P55854 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
SUMO3P55854 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6□□□□□ -1.45
SUMO3P55854 API5P1-201ENST00000424316 1510 ntBASIC6□□□□□ -1.45
SUMO3P55854 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6□□□□□ -1.45
SUMO3P55854 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SUMO3P55854 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SUMO3P55854 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SUMO3P55854 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6□□□□□ -1.45
SUMO3P55854 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
SUMO3P55854 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6□□□□□ -1.45
SUMO3P55854 PPIAP24-201ENST00000328558 471 ntBASIC6□□□□□ -1.45
SUMO3P55854 RNA5SP140-201ENST00000364524 92 ntBASIC6□□□□□ -1.45
SUMO3P55854 MRPS6P2-201ENST00000381143 370 ntBASIC6□□□□□ -1.45
SUMO3P55854 RNU6-298P-201ENST00000390888 96 ntBASIC6□□□□□ -1.45
SUMO3P55854 AL050335.1-201ENST00000396909 869 ntBASIC6□□□□□ -1.45
SUMO3P55854 ATP5HP3-201ENST00000396994 486 ntBASIC6□□□□□ -1.45
SUMO3P55854 ATF1P1-201ENST00000406040 927 ntBASIC6□□□□□ -1.45
SUMO3P55854 EIF4A1P1-201ENST00000420241 934 ntBASIC6□□□□□ -1.45
SUMO3P55854 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6□□□□□ -1.45
SUMO3P55854 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6□□□□□ -1.45
SUMO3P55854 AL139415.1-201ENST00000424862 352 ntBASIC6□□□□□ -1.45
SUMO3P55854 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6□□□□□ -1.45
SUMO3P55854 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6□□□□□ -1.45
SUMO3P55854 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6□□□□□ -1.45
SUMO3P55854 FABP5P3-201ENST00000437960 408 ntBASIC6□□□□□ -1.45
SUMO3P55854 AC098826.2-201ENST00000452011 651 ntBASIC6□□□□□ -1.45
SUMO3P55854 RPS3AP53-201ENST00000454716 778 ntBASIC6□□□□□ -1.45
SUMO3P55854 CST12P-201ENST00000457644 362 ntBASIC6□□□□□ -1.45
SUMO3P55854 AP003385.3-201ENST00000472498 287 ntBASIC6□□□□□ -1.45
SUMO3P55854 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6□□□□□ -1.45
SUMO3P55854 AC107398.1-201ENST00000486904 505 ntBASIC6□□□□□ -1.45
SUMO3P55854 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6□□□□□ -1.45
SUMO3P55854 SUMO2P4-201ENST00000504193 276 ntBASIC6□□□□□ -1.45
SUMO3P55854 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC6□□□□□ -1.45
SUMO3P55854 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6□□□□□ -1.45
SUMO3P55854 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6□□□□□ -1.45
SUMO3P55854 AC131935.1-201ENST00000524621 333 ntBASIC6□□□□□ -1.45
SUMO3P55854 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6□□□□□ -1.45
SUMO3P55854 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms