Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.54□□□□□ -1.52
FOXG1P55316 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
FOXG1P55316 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.54□□□□□ -1.52
FOXG1P55316 AC092724.1-201ENST00000624623 3397 ntBASIC5.54□□□□□ -1.52
FOXG1P55316 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
FOXG1P55316 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
FOXG1P55316 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
FOXG1P55316 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
FOXG1P55316 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
FOXG1P55316 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
FOXG1P55316 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.54□□□□□ -1.52
FOXG1P55316 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
FOXG1P55316 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC5.54□□□□□ -1.52
FOXG1P55316 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.53□□□□□ -1.52
FOXG1P55316 AC106754.1-201ENST00000562632 1513 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FOXG1P55316 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FOXG1P55316 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FOXG1P55316 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
FOXG1P55316 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
FOXG1P55316 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXG1P55316 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FOXG1P55316 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
FOXG1P55316 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXG1P55316 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXG1P55316 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.53□□□□□ -1.52
FOXG1P55316 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXG1P55316 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FOXG1P55316 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
FOXG1P55316 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
FOXG1P55316 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
FOXG1P55316 RNA5SP346-201ENST00000363541 121 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXG1P55316 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FOXG1P55316 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXG1P55316 RNU6-883P-201ENST00000384597 107 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 GCNT1P4-201ENST00000404096 329 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 MTCYBP7-201ENST00000419540 1134 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 AC092865.3-201ENST00000425390 1026 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FOXG1P55316 MRPS21P3-201ENST00000436696 262 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 VN1R110P-201ENST00000438988 971 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 POU5F1P5-201ENST00000445059 658 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 RPS15AP29-201ENST00000445539 400 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.53□□□□□ -1.52
FOXG1P55316 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.53□□□□□ -1.52
FOXG1P55316 AC068491.1-201ENST00000449539 1241 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 VN1R38P-201ENST00000450265 887 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FOXG1P55316 ART2BP-201ENST00000453501 499 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.53□□□□□ -1.52
FOXG1P55316 AC068522.1-201ENST00000482895 345 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 RPL12P30-201ENST00000488389 499 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 AC095052.1-201ENST00000509955 863 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.53□□□□□ -1.52
FOXG1P55316 MORF4L1P3-201ENST00000525966 950 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 DUXAP5-201ENST00000529668 529 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 NPIPB14P-203ENST00000532298 987 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.53□□□□□ -1.52
FOXG1P55316 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.53□□□□□ -1.52
FOXG1P55316 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.53□□□□□ -1.52
FOXG1P55316 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.53□□□□□ -1.52
FOXG1P55316 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.53□□□□□ -1.52
FOXG1P55316 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.53□□□□□ -1.52
FOXG1P55316 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.53□□□□□ -1.52
FOXG1P55316 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.53□□□□□ -1.52
FOXG1P55316 AP000919.1-201ENST00000582850 985 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 AC067852.5-201ENST00000589299 310 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.53□□□□□ -1.52
FOXG1P55316 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.53□□□□□ -1.52
FOXG1P55316 SMIM12P1-201ENST00000603004 274 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.53□□□□□ -1.52
FOXG1P55316 AL591167.1-201ENST00000607321 456 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 CR589904.2-201ENST00000612533 440 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.53□□□□□ -1.52
FOXG1P55316 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 U6.48-201ENST00000618523 106 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 AL138955.1-201ENST00000622881 1040 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 AC013437.2-201ENST00000639587 677 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.53□□□□□ -1.52
FOXG1P55316 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
FOXG1P55316 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
FOXG1P55316 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXG1P55316 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.53□□□□□ -1.52
FOXG1P55316 AL513548.1-201ENST00000562904 1724 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXG1P55316 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.53□□□□□ -1.52
FOXG1P55316 ZNF658B-201ENST00000602828 3408 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FOXG1P55316 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
FOXG1P55316 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FOXG1P55316 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FOXG1P55316 AC099654.3-201ENST00000447087 1546 ntBASIC5.53□□□□□ -1.52
FOXG1P55316 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
FOXG1P55316 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXG1P55316 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.53□□□□□ -1.52
FOXG1P55316 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms