Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF144AP50876 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RNF144AP50876 LINC01588-211ENST00000556434 892 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF144AP50876 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.49□□□□□ -1.21
RNF144AP50876 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF144AP50876 AC138761.2-201ENST00000583878 343 ntBASIC7.49□□□□□ -1.21
RNF144AP50876 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF144AP50876 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF144AP50876 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.49□□□□□ -1.21
RNF144AP50876 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.49□□□□□ -1.21
RNF144AP50876 BNIP3P10-201ENST00000605360 577 ntBASIC7.49□□□□□ -1.21
RNF144AP50876 RN7SL715P-201ENST00000606972 286 ntBASIC7.49□□□□□ -1.21
RNF144AP50876 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF144AP50876 AC093635.1-201ENST00000609028 555 ntBASIC7.49□□□□□ -1.21
RNF144AP50876 AL592227.1-201ENST00000614748 126 ntBASIC7.49□□□□□ -1.21
RNF144AP50876 AC124319.3-201ENST00000616832 526 ntBASIC7.49□□□□□ -1.21
RNF144AP50876 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF144AP50876 AC136475.10-201ENST00000620253 385 ntBASIC7.49□□□□□ -1.21
RNF144AP50876 HLA-B-257ENST00000640094 147 ntBASIC7.49□□□□□ -1.21
RNF144AP50876 AL121936.2-201ENST00000641935 662 ntBASIC7.49□□□□□ -1.21
RNF144AP50876 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RNF144AP50876 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RNF144AP50876 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF144AP50876 ARMC3-204ENST00000409983 2779 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
RNF144AP50876 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF144AP50876 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF144AP50876 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
RNF144AP50876 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF144AP50876 KLRC1-203ENST00000408006 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF144AP50876 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RNF144AP50876 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF144AP50876 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC7.49□□□□□ -1.21
RNF144AP50876 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF144AP50876 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC7.49□□□□□ -1.21
RNF144AP50876 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC7.49□□□□□ -1.21
RNF144AP50876 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RNF144AP50876 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF144AP50876 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF144AP50876 WASF4P-201ENST00000444248 1494 ntBASIC7.49□□□□□ -1.21
RNF144AP50876 AL008638.3-201ENST00000623027 5182 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF144AP50876 CLSTN2-AS1-201ENST00000513309 2693 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RNF144AP50876 HSPA8P17-201ENST00000427029 1382 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF144AP50876 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF144AP50876 MTCO1P9-201ENST00000505577 1534 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF144AP50876 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC7.48□□□□□ -1.21
RNF144AP50876 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF144AP50876 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
RNF144AP50876 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC7.48□□□□□ -1.21
RNF144AP50876 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RNF144AP50876 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF144AP50876 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
RNF144AP50876 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF144AP50876 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC7.48□□□□□ -1.21
RNF144AP50876 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RNF144AP50876 RNU5F-6P-201ENST00000362979 116 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
RNF144AP50876 MIR30C1-201ENST00000385227 89 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
RNF144AP50876 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC7.48□□□□□ -1.21
RNF144AP50876 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC7.48□□□□□ -1.21
RNF144AP50876 ZNF90P2-204ENST00000419323 1075 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC7.48□□□□□ -1.21
RNF144AP50876 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.48□□□□□ -1.21
RNF144AP50876 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC7.48□□□□□ -1.21
RNF144AP50876 AC002069.1-201ENST00000429649 1159 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
RNF144AP50876 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC7.48□□□□□ -1.21
RNF144AP50876 UBE2FP3-201ENST00000436366 524 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 LDHAP2-201ENST00000437325 985 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.48□□□□□ -1.21
RNF144AP50876 HMGB3P9-201ENST00000441799 583 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC7.48□□□□□ -1.21
RNF144AP50876 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.48□□□□□ -1.21
RNF144AP50876 EIF4A1P6-201ENST00000448133 1210 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 TUBB4BP2-201ENST00000454125 798 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 RPL7AP52-201ENST00000458096 790 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 RPL5P17-201ENST00000469685 877 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 AC090589.1-201ENST00000473109 362 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 RPS3AP14-201ENST00000483907 780 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 AF305872.1-201ENST00000485217 471 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 RN7SL28P-201ENST00000488836 298 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 RN7SL792P-201ENST00000496286 305 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC7.48□□□□□ -1.21
RNF144AP50876 AC011352.3-201ENST00000505162 593 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC7.48□□□□□ -1.21
RNF144AP50876 AC090835.1-201ENST00000515189 1024 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.48□□□□□ -1.21
RNF144AP50876 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF144AP50876 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.48□□□□□ -1.21
RNF144AP50876 AC246817.2-201ENST00000523971 577 ntTSL 5 BASIC7.48□□□□□ -1.21
RNF144AP50876 AC093027.1-201ENST00000546698 429 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 AC079598.4-201ENST00000549647 265 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 AL359212.1-201ENST00000556608 614 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 MT1L-202ENST00000566367 78 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 LINC02178-201ENST00000566876 425 ntTSL 3 BASIC7.48□□□□□ -1.21
RNF144AP50876 RN7SL154P-201ENST00000578043 324 ntBASIC7.48□□□□□ -1.21
RNF144AP50876 AC087393.3-201ENST00000584971 166 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms