Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.38□□□□□ -1.39
LHX1P48742 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
LHX1P48742 SELENOWP1-201ENST00000322792 252 ntBASIC6.38□□□□□ -1.39
LHX1P48742 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LHX1P48742 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.38□□□□□ -1.39
LHX1P48742 AL035660.1-201ENST00000422041 222 ntBASIC6.38□□□□□ -1.39
LHX1P48742 KIF4CP-201ENST00000422742 1279 ntBASIC6.38□□□□□ -1.39
LHX1P48742 AC016027.5-201ENST00000427227 210 ntBASIC6.38□□□□□ -1.39
LHX1P48742 CDY8P-201ENST00000428380 1279 ntBASIC6.38□□□□□ -1.39
LHX1P48742 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.38□□□□□ -1.39
LHX1P48742 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.38□□□□□ -1.39
LHX1P48742 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.38□□□□□ -1.39
LHX1P48742 CDY20P-201ENST00000447528 1279 ntBASIC6.38□□□□□ -1.39
LHX1P48742 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.38□□□□□ -1.39
LHX1P48742 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC6.38□□□□□ -1.39
LHX1P48742 SEPT14P1-201ENST00000458703 648 ntBASIC6.38□□□□□ -1.39
LHX1P48742 AC124945.1-201ENST00000485133 188 ntBASIC6.38□□□□□ -1.39
LHX1P48742 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.38□□□□□ -1.39
LHX1P48742 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.38□□□□□ -1.39
LHX1P48742 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LHX1P48742 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.38□□□□□ -1.39
LHX1P48742 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LHX1P48742 AP000648.1-201ENST00000529682 397 ntBASIC6.38□□□□□ -1.39
LHX1P48742 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.38□□□□□ -1.39
LHX1P48742 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.38□□□□□ -1.39
LHX1P48742 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.38□□□□□ -1.39
LHX1P48742 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.38□□□□□ -1.39
LHX1P48742 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.38□□□□□ -1.39
LHX1P48742 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.38□□□□□ -1.39
LHX1P48742 AC115989.2-201ENST00000578640 563 ntBASIC6.38□□□□□ -1.39
LHX1P48742 AL031601.1-201ENST00000605702 394 ntBASIC6.38□□□□□ -1.39
LHX1P48742 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.38□□□□□ -1.39
LHX1P48742 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.38□□□□□ -1.39
LHX1P48742 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
LHX1P48742 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LHX1P48742 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.38□□□□□ -1.39
LHX1P48742 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.38□□□□□ -1.39
LHX1P48742 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LHX1P48742 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
LHX1P48742 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.38□□□□□ -1.39
LHX1P48742 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LHX1P48742 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LHX1P48742 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
LHX1P48742 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
LHX1P48742 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LHX1P48742 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.37□□□□□ -1.39
LHX1P48742 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
LHX1P48742 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LHX1P48742 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LHX1P48742 RN7SKP128-201ENST00000364270 303 ntBASIC6.37□□□□□ -1.39
LHX1P48742 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.37□□□□□ -1.39
LHX1P48742 AK3P5-201ENST00000432033 519 ntBASIC6.37□□□□□ -1.39
LHX1P48742 AL445928.1-201ENST00000435545 222 ntBASIC6.37□□□□□ -1.39
LHX1P48742 NDUFS5P5-201ENST00000437256 321 ntBASIC6.37□□□□□ -1.39
LHX1P48742 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.37□□□□□ -1.39
LHX1P48742 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.37□□□□□ -1.39
LHX1P48742 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.37□□□□□ -1.39
LHX1P48742 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.37□□□□□ -1.39
LHX1P48742 HLA-DPA3-207ENST00000454398 229 ntBASIC6.37□□□□□ -1.39
LHX1P48742 AC084754.1-201ENST00000463466 464 ntBASIC6.37□□□□□ -1.39
LHX1P48742 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LHX1P48742 AC008629.2-201ENST00000503783 483 ntBASIC6.37□□□□□ -1.39
LHX1P48742 AC021733.2-201ENST00000518830 497 ntBASIC6.37□□□□□ -1.39
LHX1P48742 TRIM51DP-201ENST00000529746 596 ntBASIC6.37□□□□□ -1.39
LHX1P48742 OR4A42P-201ENST00000531397 938 ntBASIC6.37□□□□□ -1.39
LHX1P48742 PCNAP4-201ENST00000532690 730 ntBASIC6.37□□□□□ -1.39
LHX1P48742 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
LHX1P48742 AC068305.2-201ENST00000550567 1205 ntBASIC6.37□□□□□ -1.39
LHX1P48742 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.37□□□□□ -1.39
LHX1P48742 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.37□□□□□ -1.39
LHX1P48742 SETP3-201ENST00000581726 813 ntBASIC6.37□□□□□ -1.39
LHX1P48742 AC004890.3-201ENST00000605566 1095 ntBASIC6.37□□□□□ -1.39
LHX1P48742 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.37□□□□□ -1.39
LHX1P48742 AL021918.2-201ENST00000613415 194 ntBASIC6.37□□□□□ -1.39
LHX1P48742 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.37□□□□□ -1.39
LHX1P48742 AP001962.1-201ENST00000624114 559 ntBASIC6.37□□□□□ -1.39
LHX1P48742 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.37□□□□□ -1.39
LHX1P48742 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
LHX1P48742 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LHX1P48742 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LHX1P48742 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LHX1P48742 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LHX1P48742 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.37□□□□□ -1.39
LHX1P48742 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LHX1P48742 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.37□□□□□ -1.39
LHX1P48742 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
LHX1P48742 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LHX1P48742 THAP12P9-201ENST00000503971 2360 ntBASIC6.36□□□□□ -1.39
LHX1P48742 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LHX1P48742 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
LHX1P48742 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LHX1P48742 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
LHX1P48742 AL360271.1-201ENST00000395679 510 ntBASIC6.36□□□□□ -1.39
LHX1P48742 SNORA11.3-201ENST00000408471 128 ntBASIC6.36□□□□□ -1.39
LHX1P48742 MIR1203-201ENST00000408812 85 ntBASIC6.36□□□□□ -1.39
LHX1P48742 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.36□□□□□ -1.39
LHX1P48742 RPS7P3-201ENST00000443360 580 ntBASIC6.36□□□□□ -1.39
LHX1P48742 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
LHX1P48742 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.36□□□□□ -1.39
LHX1P48742 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms