Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RN7SL37P-201ENST00000490461 307 ntBASIC5.6□□□□□ -1.51
SOX2P48431 RPL19P11-201ENST00000495944 589 ntBASIC5.6□□□□□ -1.51
SOX2P48431 PRELID3BP6-201ENST00000503839 571 ntBASIC5.6□□□□□ -1.51
SOX2P48431 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SOX2P48431 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.6□□□□□ -1.51
SOX2P48431 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.6□□□□□ -1.51
SOX2P48431 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.6□□□□□ -1.51
SOX2P48431 HMGN1P17-201ENST00000513734 295 ntBASIC5.6□□□□□ -1.51
SOX2P48431 RN7SKP67-201ENST00000515905 235 ntBASIC5.6□□□□□ -1.51
SOX2P48431 IGKV1D-22-201ENST00000518953 324 ntBASIC5.6□□□□□ -1.51
SOX2P48431 MTND2P32-201ENST00000521584 1038 ntBASIC5.6□□□□□ -1.51
SOX2P48431 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX2P48431 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.6□□□□□ -1.51
SOX2P48431 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.6□□□□□ -1.51
SOX2P48431 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.6□□□□□ -1.51
SOX2P48431 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC5.6□□□□□ -1.51
SOX2P48431 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC5.6□□□□□ -1.51
SOX2P48431 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX2P48431 RPS27AP19-201ENST00000597285 458 ntBASIC5.6□□□□□ -1.51
SOX2P48431 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.6□□□□□ -1.51
SOX2P48431 AC091133.5-201ENST00000603088 301 ntBASIC5.6□□□□□ -1.51
SOX2P48431 SNORD96A-201ENST00000606577 79 ntBASIC5.6□□□□□ -1.51
SOX2P48431 AP001033.2-201ENST00000609701 1003 ntBASIC5.6□□□□□ -1.51
SOX2P48431 AC004241.3-201ENST00000611728 517 ntBASIC5.6□□□□□ -1.51
SOX2P48431 AC007347.2-201ENST00000623044 180 ntBASIC5.6□□□□□ -1.51
SOX2P48431 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX2P48431 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX2P48431 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SOX2P48431 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX2P48431 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.6□□□□□ -1.51
SOX2P48431 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX2P48431 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.6□□□□□ -1.51
SOX2P48431 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.6□□□□□ -1.51
SOX2P48431 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX2P48431 ZNF101P1-201ENST00000435701 1720 ntBASIC5.6□□□□□ -1.51
SOX2P48431 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
SOX2P48431 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SOX2P48431 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.59□□□□□ -1.51
SOX2P48431 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SOX2P48431 AC092701.1-201ENST00000623627 1551 ntBASIC5.59□□□□□ -1.51
SOX2P48431 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.59□□□□□ -1.51
SOX2P48431 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SOX2P48431 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.59□□□□□ -1.51
SOX2P48431 AL049869.1-201ENST00000556933 1402 ntBASIC5.59□□□□□ -1.51
SOX2P48431 AOX3P-204ENST00000491025 2107 ntBASIC5.59□□□□□ -1.51
SOX2P48431 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SOX2P48431 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.59□□□□□ -1.51
SOX2P48431 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.59□□□□□ -1.51
SOX2P48431 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SOX2P48431 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SOX2P48431 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.59□□□□□ -1.51
SOX2P48431 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SOX2P48431 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.59□□□□□ -1.51
SOX2P48431 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SOX2P48431 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SOX2P48431 RAD1P1-201ENST00000231383 813 ntBASIC5.59□□□□□ -1.51
SOX2P48431 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SOX2P48431 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SOX2P48431 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SOX2P48431 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SOX2P48431 SNORA70.9-201ENST00000384370 135 ntBASIC5.59□□□□□ -1.51
SOX2P48431 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SOX2P48431 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.59□□□□□ -1.51
SOX2P48431 AL079341.1-201ENST00000404701 1207 ntBASIC5.59□□□□□ -1.51
SOX2P48431 MIR1231-201ENST00000408101 92 ntBASIC5.59□□□□□ -1.51
SOX2P48431 MTCO2P8-201ENST00000412213 658 ntBASIC5.59□□□□□ -1.51
SOX2P48431 HMGA1P8-201ENST00000414130 321 ntBASIC5.59□□□□□ -1.51
SOX2P48431 NIFKP3-201ENST00000417799 865 ntBASIC5.59□□□□□ -1.51
SOX2P48431 SETP9-201ENST00000423837 832 ntBASIC5.59□□□□□ -1.51
SOX2P48431 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.59□□□□□ -1.51
SOX2P48431 OR52S1P-201ENST00000427016 937 ntBASIC5.59□□□□□ -1.51
SOX2P48431 CENPN-204ENST00000428963 971 ntTSL 2 BASIC5.59□□□□□ -1.51
SOX2P48431 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.59□□□□□ -1.51
SOX2P48431 CR391992.1-201ENST00000438601 394 ntBASIC5.59□□□□□ -1.51
SOX2P48431 OR13K1P-201ENST00000444577 975 ntBASIC5.59□□□□□ -1.51
SOX2P48431 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SOX2P48431 RBBP4P1-201ENST00000502424 1276 ntBASIC5.59□□□□□ -1.51
SOX2P48431 AC121161.1-201ENST00000510606 652 ntBASIC5.59□□□□□ -1.51
SOX2P48431 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.59□□□□□ -1.51
SOX2P48431 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.59□□□□□ -1.51
SOX2P48431 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.59□□□□□ -1.51
SOX2P48431 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SOX2P48431 OR4A17P-201ENST00000526032 904 ntBASIC5.59□□□□□ -1.51
SOX2P48431 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.59□□□□□ -1.51
SOX2P48431 OR4A40P-201ENST00000533878 948 ntBASIC5.59□□□□□ -1.51
SOX2P48431 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.59□□□□□ -1.51
SOX2P48431 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.59□□□□□ -1.51
SOX2P48431 MIR4258-201ENST00000580920 91 ntBASIC5.59□□□□□ -1.51
SOX2P48431 FXYD6P1-201ENST00000604857 285 ntBASIC5.59□□□□□ -1.51
SOX2P48431 AC026741.1-201ENST00000605892 482 ntBASIC5.59□□□□□ -1.51
SOX2P48431 AC004908.3-201ENST00000610248 625 ntBASIC5.59□□□□□ -1.51
SOX2P48431 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC5.59□□□□□ -1.51
SOX2P48431 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.59□□□□□ -1.51
SOX2P48431 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.59□□□□□ -1.51
SOX2P48431 AC027559.1-201ENST00000636288 271 ntBASIC5.59□□□□□ -1.51
SOX2P48431 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
SOX2P48431 AL359976.1-201ENST00000418655 3528 ntBASIC5.59□□□□□ -1.51
SOX2P48431 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SOX2P48431 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.59□□□□□ -1.52
SOX2P48431 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms