Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CNGA1P29973 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CNGA1P29973 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CNGA1P29973 RNA5SP510-201ENST00000364697 99 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 MIR620-201ENST00000385232 95 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 AL353692.2-201ENST00000407054 335 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 HMGN1P20-201ENST00000411849 300 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 CBX1P3-201ENST00000413296 527 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CNGA1P29973 CDY17P-201ENST00000414121 1282 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CNGA1P29973 AC083862.1-201ENST00000427378 1242 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 CDY8P-201ENST00000428380 1279 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CNGA1P29973 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC7.42□□□□□ -1.22
CNGA1P29973 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.42□□□□□ -1.22
CNGA1P29973 AC245517.2-201ENST00000442890 346 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 CRYGGP-201ENST00000443337 145 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.42□□□□□ -1.22
CNGA1P29973 CDY20P-201ENST00000447528 1279 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.42□□□□□ -1.22
CNGA1P29973 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC7.42□□□□□ -1.22
CNGA1P29973 MTCO2P9-201ENST00000503214 694 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 AC106800.2-201ENST00000514009 1103 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 HMGB1P46-201ENST00000520062 610 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 AC008429.2-201ENST00000523057 864 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 MTND1P6-201ENST00000523621 946 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 AC027369.2-201ENST00000528030 440 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC7.42□□□□□ -1.22
CNGA1P29973 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.42□□□□□ -1.22
CNGA1P29973 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC7.42□□□□□ -1.22
CNGA1P29973 AC008055.1-201ENST00000547032 609 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CNGA1P29973 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.42□□□□□ -1.22
CNGA1P29973 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.42□□□□□ -1.22
CNGA1P29973 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC7.42□□□□□ -1.22
CNGA1P29973 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CNGA1P29973 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.42□□□□□ -1.22
CNGA1P29973 RN7SL208P-201ENST00000577964 296 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 AL049840.5-201ENST00000602827 552 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.42□□□□□ -1.22
CNGA1P29973 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.42□□□□□ -1.22
CNGA1P29973 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.42□□□□□ -1.22
CNGA1P29973 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CNGA1P29973 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CNGA1P29973 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
CNGA1P29973 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.42□□□□□ -1.22
CNGA1P29973 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CNGA1P29973 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CNGA1P29973 AC023245.2-201ENST00000530760 2978 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.42□□□□□ -1.22
CNGA1P29973 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CNGA1P29973 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CNGA1P29973 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CNGA1P29973 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.42□□□□□ -1.22
CNGA1P29973 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CNGA1P29973 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
CNGA1P29973 AC093225.1-201ENST00000506867 1408 ntBASIC7.42□□□□□ -1.22
CNGA1P29973 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CNGA1P29973 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.42□□□□□ -1.22
CNGA1P29973 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
CNGA1P29973 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.42□□□□□ -1.22
CNGA1P29973 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CNGA1P29973 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.41□□□□□ -1.22
CNGA1P29973 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
CNGA1P29973 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 Z97989.1-201ENST00000531702 2421 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC7.41□□□□□ -1.22
CNGA1P29973 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC7.41□□□□□ -1.22
CNGA1P29973 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
CNGA1P29973 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CNGA1P29973 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.41□□□□□ -1.22
CNGA1P29973 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.41□□□□□ -1.22
CNGA1P29973 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.41□□□□□ -1.22
CNGA1P29973 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.41□□□□□ -1.22
CNGA1P29973 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 SNORA51.1-201ENST00000363243 140 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 Z86062.1-201ENST00000406773 777 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC7.41□□□□□ -1.22
CNGA1P29973 RPS3P2-201ENST00000421346 701 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.41□□□□□ -1.22
CNGA1P29973 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC7.41□□□□□ -1.22
CNGA1P29973 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.41□□□□□ -1.22
CNGA1P29973 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.41□□□□□ -1.22
CNGA1P29973 AL645936.1-201ENST00000441979 518 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.41□□□□□ -1.22
CNGA1P29973 MTND2P6-201ENST00000455337 1030 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 AC084754.1-201ENST00000463466 464 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 H3F3AP3-201ENST00000497682 407 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 RBBP4P1-201ENST00000502424 1276 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms