Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.15□□□□□ -1.26
SMARCA1P28370 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.15□□□□□ -1.26
SMARCA1P28370 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.15□□□□□ -1.26
SMARCA1P28370 AKR1B10P1-201ENST00000425765 942 ntBASIC7.15□□□□□ -1.26
SMARCA1P28370 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.15□□□□□ -1.26
SMARCA1P28370 LDHAP2-201ENST00000437325 985 ntBASIC7.15□□□□□ -1.26
SMARCA1P28370 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC7.15□□□□□ -1.26
SMARCA1P28370 TRIM60P16-201ENST00000444048 694 ntBASIC7.15□□□□□ -1.26
SMARCA1P28370 RPL23AP60-201ENST00000450011 454 ntBASIC7.15□□□□□ -1.26
SMARCA1P28370 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.15□□□□□ -1.26
SMARCA1P28370 PPIAP7-201ENST00000454070 489 ntBASIC7.15□□□□□ -1.26
SMARCA1P28370 EIF4A2P2-201ENST00000455776 1070 ntBASIC7.15□□□□□ -1.26
SMARCA1P28370 CAB39P1-201ENST00000502277 460 ntBASIC7.15□□□□□ -1.26
SMARCA1P28370 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.15□□□□□ -1.26
SMARCA1P28370 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.15□□□□□ -1.26
SMARCA1P28370 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SMARCA1P28370 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.15□□□□□ -1.26
SMARCA1P28370 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
SMARCA1P28370 AP000620.1-201ENST00000527147 504 ntBASIC7.15□□□□□ -1.26
SMARCA1P28370 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.15□□□□□ -1.26
SMARCA1P28370 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC7.15□□□□□ -1.26
SMARCA1P28370 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.15□□□□□ -1.26
SMARCA1P28370 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.15□□□□□ -1.26
SMARCA1P28370 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC7.15□□□□□ -1.26
SMARCA1P28370 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC7.15□□□□□ -1.26
SMARCA1P28370 MRPS21P8-201ENST00000569196 235 ntBASIC7.15□□□□□ -1.26
SMARCA1P28370 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.15□□□□□ -1.26
SMARCA1P28370 AC004836.1-201ENST00000623032 634 ntBASIC7.15□□□□□ -1.26
SMARCA1P28370 AL356490.1-201ENST00000623079 479 ntBASIC7.15□□□□□ -1.26
SMARCA1P28370 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
SMARCA1P28370 CCNT2P1-201ENST00000423082 1315 ntBASIC7.15□□□□□ -1.26
SMARCA1P28370 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.15□□□□□ -1.26
SMARCA1P28370 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SMARCA1P28370 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC7.15□□□□□ -1.27
SMARCA1P28370 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SMARCA1P28370 CDY11P-201ENST00000447168 1651 ntBASIC7.15□□□□□ -1.27
SMARCA1P28370 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SMARCA1P28370 AP003486.1-201ENST00000525716 3994 ntBASIC7.15□□□□□ -1.27
SMARCA1P28370 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SMARCA1P28370 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.15□□□□□ -1.27
SMARCA1P28370 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
SMARCA1P28370 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.14□□□□□ -1.27
SMARCA1P28370 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
SMARCA1P28370 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
SMARCA1P28370 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
SMARCA1P28370 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SMARCA1P28370 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SMARCA1P28370 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SMARCA1P28370 OR56A4-201ENST00000330728 1209 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 FUNDC2P3-201ENST00000334716 533 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.14□□□□□ -1.27
SMARCA1P28370 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.14□□□□□ -1.27
SMARCA1P28370 OOSP1-201ENST00000398992 1270 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.14□□□□□ -1.27
SMARCA1P28370 RNA5SP431-201ENST00000410312 120 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.14□□□□□ -1.27
SMARCA1P28370 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SMARCA1P28370 AC007562.1-201ENST00000421819 517 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.14□□□□□ -1.27
SMARCA1P28370 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.14□□□□□ -1.27
SMARCA1P28370 AC007568.1-201ENST00000422912 471 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 FGF12-202ENST00000430714 603 ntTSL 2 BASIC7.14□□□□□ -1.27
SMARCA1P28370 EIF3EP1-201ENST00000433978 1316 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 AC007679.3-201ENST00000434035 414 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 SCAND3P1-201ENST00000439854 1060 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 AC023274.2-201ENST00000445264 521 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.14□□□□□ -1.27
SMARCA1P28370 AC009963.3-201ENST00000458090 486 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
SMARCA1P28370 AC022325.1-201ENST00000502748 2199 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.14□□□□□ -1.27
SMARCA1P28370 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.14□□□□□ -1.27
SMARCA1P28370 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 CYP4F27P-201ENST00000514557 494 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 CR383658.1-201ENST00000514609 734 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 AC104997.1-201ENST00000519761 717 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC7.14□□□□□ -1.27
SMARCA1P28370 GTF2IP11-201ENST00000526931 420 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
SMARCA1P28370 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SMARCA1P28370 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SMARCA1P28370 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SMARCA1P28370 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC7.14□□□□□ -1.27
SMARCA1P28370 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.14□□□□□ -1.27
SMARCA1P28370 OR4H6P-201ENST00000563771 921 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.14□□□□□ -1.27
SMARCA1P28370 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC7.14□□□□□ -1.27
SMARCA1P28370 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.14□□□□□ -1.27
SMARCA1P28370 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC7.14□□□□□ -1.27
SMARCA1P28370 AC141002.1-201ENST00000607025 279 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 FAM27E2-201ENST00000619668 403 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 AL137067.2-201ENST00000621202 131 ntBASIC7.14□□□□□ -1.27
SMARCA1P28370 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.14□□□□□ -1.27
SMARCA1P28370 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.14□□□□□ -1.27
SMARCA1P28370 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC7.14□□□□□ -1.27
SMARCA1P28370 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SMARCA1P28370 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SMARCA1P28370 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
SMARCA1P28370 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms