Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.9□□□□□ -1.46
ABCD3P28288 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ABCD3P28288 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.9□□□□□ -1.46
ABCD3P28288 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ABCD3P28288 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.9□□□□□ -1.46
ABCD3P28288 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ABCD3P28288 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
ABCD3P28288 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ABCD3P28288 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.9□□□□□ -1.46
ABCD3P28288 RNA5SP77-201ENST00000365394 120 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ABCD3P28288 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
ABCD3P28288 RPL23AP18-201ENST00000416139 468 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.9□□□□□ -1.46
ABCD3P28288 BMP6P1-201ENST00000431230 679 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 ZNF965P-201ENST00000432501 817 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 HMGB3P10-201ENST00000434734 572 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.9□□□□□ -1.46
ABCD3P28288 AC074367.1-201ENST00000438685 1125 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 VN1R38P-201ENST00000450265 887 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.9□□□□□ -1.46
ABCD3P28288 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.9□□□□□ -1.46
ABCD3P28288 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.9□□□□□ -1.46
ABCD3P28288 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.9□□□□□ -1.46
ABCD3P28288 AC098818.1-201ENST00000478593 252 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 AC093663.2-201ENST00000484625 313 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.9□□□□□ -1.46
ABCD3P28288 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.9□□□□□ -1.46
ABCD3P28288 GUSBP9-201ENST00000510138 584 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ABCD3P28288 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.9□□□□□ -1.46
ABCD3P28288 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.9□□□□□ -1.46
ABCD3P28288 SNORA74.1-201ENST00000516320 180 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 COX6B1P4-201ENST00000519826 484 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.9□□□□□ -1.46
ABCD3P28288 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.9□□□□□ -1.46
ABCD3P28288 AC008055.1-201ENST00000547032 609 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.9□□□□□ -1.46
ABCD3P28288 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.9□□□□□ -1.46
ABCD3P28288 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.9□□□□□ -1.46
ABCD3P28288 CKS1BP1-201ENST00000555221 240 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 AL136520.1-202ENST00000555494 763 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.9□□□□□ -1.46
ABCD3P28288 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.9□□□□□ -1.46
ABCD3P28288 RN7SL475P-201ENST00000583379 298 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 ADAD1P2-201ENST00000588476 646 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 AL589863.1-201ENST00000595383 631 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 AC011500.1-201ENST00000601963 469 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 AL671309.1-201ENST00000603750 544 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 AL355802.4-201ENST00000607635 548 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 AC135803.1-201ENST00000608748 565 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 AC012676.3-201ENST00000614983 479 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ABCD3P28288 AL122023.1-201ENST00000622847 530 ntBASIC5.9□□□□□ -1.46
ABCD3P28288 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.9□□□□□ -1.46
ABCD3P28288 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.9□□□□□ -1.46
ABCD3P28288 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.9□□□□□ -1.46
ABCD3P28288 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ABCD3P28288 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
ABCD3P28288 AC093297.3-201ENST00000607056 2517 ntBASIC5.9□□□□□ -1.47
ABCD3P28288 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ABCD3P28288 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
ABCD3P28288 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ABCD3P28288 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ABCD3P28288 AC105235.1-201ENST00000623208 1816 ntBASIC5.9□□□□□ -1.47
ABCD3P28288 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
ABCD3P28288 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ABCD3P28288 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.9□□□□□ -1.47
ABCD3P28288 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
ABCD3P28288 LINC01613-201ENST00000561476 2780 ntBASIC5.89□□□□□ -1.47
ABCD3P28288 AL731556.1-201ENST00000394628 3711 ntBASIC5.89□□□□□ -1.47
ABCD3P28288 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ABCD3P28288 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ABCD3P28288 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ABCD3P28288 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ABCD3P28288 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ABCD3P28288 SPATA2P1-201ENST00000431223 2055 ntBASIC5.89□□□□□ -1.47
ABCD3P28288 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ABCD3P28288 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.89□□□□□ -1.47
ABCD3P28288 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.89□□□□□ -1.47
ABCD3P28288 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ABCD3P28288 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
ABCD3P28288 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.89□□□□□ -1.47
ABCD3P28288 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ABCD3P28288 PSMA6P1-201ENST00000400275 741 ntBASIC5.89□□□□□ -1.47
ABCD3P28288 OR2W4P-201ENST00000406496 926 ntBASIC5.89□□□□□ -1.47
ABCD3P28288 RNU2-22P-201ENST00000411266 212 ntBASIC5.89□□□□□ -1.47
ABCD3P28288 RANP4-201ENST00000413361 655 ntBASIC5.89□□□□□ -1.47
ABCD3P28288 AL357078.2-201ENST00000416486 427 ntBASIC5.89□□□□□ -1.47
ABCD3P28288 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
ABCD3P28288 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.89□□□□□ -1.47
ABCD3P28288 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ABCD3P28288 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.89□□□□□ -1.47
ABCD3P28288 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ABCD3P28288 EMC3-AS1-205ENST00000438698 534 ntBASIC5.89□□□□□ -1.47
ABCD3P28288 OR2L9P-201ENST00000444456 913 ntBASIC5.89□□□□□ -1.47
ABCD3P28288 AL049829.1-201ENST00000465411 156 ntBASIC5.89□□□□□ -1.47
ABCD3P28288 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.89□□□□□ -1.47
ABCD3P28288 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
ABCD3P28288 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms