Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CD48P09326 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CD48P09326 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CD48P09326 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CD48P09326 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.17□□□□□ -1.42
CD48P09326 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CD48P09326 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.17□□□□□ -1.42
CD48P09326 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.17□□□□□ -1.42
CD48P09326 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
CD48P09326 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CD48P09326 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD48P09326 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD48P09326 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.17□□□□□ -1.42
CD48P09326 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CD48P09326 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.17□□□□□ -1.42
CD48P09326 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD48P09326 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
CD48P09326 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD48P09326 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.17□□□□□ -1.42
CD48P09326 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.17□□□□□ -1.42
CD48P09326 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CD48P09326 RPS7P3-201ENST00000443360 580 ntBASIC6.17□□□□□ -1.42
CD48P09326 EEF1B2P3-201ENST00000447718 678 ntBASIC6.17□□□□□ -1.42
CD48P09326 AL445466.1-201ENST00000448432 357 ntBASIC6.17□□□□□ -1.42
CD48P09326 AC021006.1-201ENST00000489849 553 ntBASIC6.17□□□□□ -1.42
CD48P09326 AC083795.1-201ENST00000491760 320 ntBASIC6.17□□□□□ -1.42
CD48P09326 AC090058.1-201ENST00000498788 435 ntBASIC6.17□□□□□ -1.42
CD48P09326 AC008629.2-201ENST00000503783 483 ntBASIC6.17□□□□□ -1.42
CD48P09326 HSD3BP3-201ENST00000514706 994 ntBASIC6.17□□□□□ -1.42
CD48P09326 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.17□□□□□ -1.42
CD48P09326 AC110056.1-201ENST00000525759 911 ntBASIC6.17□□□□□ -1.42
CD48P09326 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.17□□□□□ -1.42
CD48P09326 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.17□□□□□ -1.42
CD48P09326 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.17□□□□□ -1.42
CD48P09326 MIR4502-201ENST00000580432 81 ntBASIC6.17□□□□□ -1.42
CD48P09326 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.17□□□□□ -1.42
CD48P09326 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.17□□□□□ -1.42
CD48P09326 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.17□□□□□ -1.42
CD48P09326 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.17□□□□□ -1.42
CD48P09326 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.17□□□□□ -1.42
CD48P09326 AL021918.2-201ENST00000613415 194 ntBASIC6.17□□□□□ -1.42
CD48P09326 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD48P09326 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CD48P09326 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD48P09326 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD48P09326 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD48P09326 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CD48P09326 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD48P09326 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD48P09326 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD48P09326 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD48P09326 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
CD48P09326 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CD48P09326 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CD48P09326 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.16□□□□□ -1.42
CD48P09326 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CD48P09326 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.16□□□□□ -1.42
CD48P09326 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CD48P09326 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.16□□□□□ -1.42
CD48P09326 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD48P09326 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CD48P09326 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.16□□□□□ -1.42
CD48P09326 AL354890.1-201ENST00000413730 346 ntBASIC6.16□□□□□ -1.42
CD48P09326 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.16□□□□□ -1.42
CD48P09326 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.16□□□□□ -1.42
CD48P09326 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CD48P09326 PNKDP1-201ENST00000435914 430 ntBASIC6.16□□□□□ -1.42
CD48P09326 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CD48P09326 TRIM60P16-201ENST00000444048 694 ntBASIC6.16□□□□□ -1.42
CD48P09326 TIMM8BP2-201ENST00000445940 251 ntBASIC6.16□□□□□ -1.42
CD48P09326 OR52I1-201ENST00000450052 1050 ntBASIC6.16□□□□□ -1.42
CD48P09326 AL603882.1-201ENST00000463059 681 ntBASIC6.16□□□□□ -1.42
CD48P09326 SNRPCP3-201ENST00000474888 476 ntBASIC6.16□□□□□ -1.42
CD48P09326 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.16□□□□□ -1.42
CD48P09326 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CD48P09326 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.16□□□□□ -1.42
CD48P09326 RN7SKP183-201ENST00000517169 324 ntBASIC6.16□□□□□ -1.42
CD48P09326 MTND2P7-201ENST00000521337 640 ntBASIC6.16□□□□□ -1.42
CD48P09326 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.16□□□□□ -1.42
CD48P09326 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.16□□□□□ -1.42
CD48P09326 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CD48P09326 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.16□□□□□ -1.42
CD48P09326 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.16□□□□□ -1.42
CD48P09326 AL136228.1-201ENST00000622221 319 ntBASIC6.16□□□□□ -1.42
CD48P09326 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
CD48P09326 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD48P09326 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CD48P09326 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD48P09326 AC078880.4-201ENST00000617627 1749 ntBASIC6.16□□□□□ -1.42
CD48P09326 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD48P09326 GNL2P1-201ENST00000451274 2190 ntBASIC6.16□□□□□ -1.42
CD48P09326 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.15□□□□□ -1.42
CD48P09326 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
CD48P09326 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CD48P09326 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CD48P09326 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CD48P09326 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CD48P09326 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.15□□□□□ -1.42
CD48P09326 RPS20P25-201ENST00000412447 352 ntBASIC6.15□□□□□ -1.42
CD48P09326 AC099677.3-201ENST00000427081 395 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms