Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFBP01127 AC012078.1-201ENST00000405035 1646 ntBASIC6.21□□□□□ -1.42
PDGFBP01127 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFBP01127 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.21□□□□□ -1.42
PDGFBP01127 AC024651.2-201ENST00000562480 2098 ntBASIC6.21□□□□□ -1.42
PDGFBP01127 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.2□□□□□ -1.42
PDGFBP01127 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFBP01127 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.2□□□□□ -1.42
PDGFBP01127 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.2□□□□□ -1.42
PDGFBP01127 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFBP01127 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFBP01127 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.2□□□□□ -1.42
PDGFBP01127 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PDGFBP01127 AL391422.1-201ENST00000402155 436 ntBASIC6.2□□□□□ -1.42
PDGFBP01127 MIR1286-201ENST00000408112 78 ntBASIC6.2□□□□□ -1.42
PDGFBP01127 AL096829.1-201ENST00000413677 457 ntBASIC6.2□□□□□ -1.42
PDGFBP01127 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.2□□□□□ -1.42
PDGFBP01127 SMC4P1-201ENST00000414479 527 ntBASIC6.2□□□□□ -1.42
PDGFBP01127 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFBP01127 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.2□□□□□ -1.42
PDGFBP01127 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.2□□□□□ -1.42
PDGFBP01127 EEF1B2P5-201ENST00000444820 548 ntBASIC6.2□□□□□ -1.42
PDGFBP01127 AC108161.1-201ENST00000461060 402 ntBASIC6.2□□□□□ -1.42
PDGFBP01127 AC135999.1-201ENST00000478962 479 ntBASIC6.2□□□□□ -1.42
PDGFBP01127 GAPDHP71-201ENST00000511530 1003 ntBASIC6.2□□□□□ -1.42
PDGFBP01127 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.2□□□□□ -1.42
PDGFBP01127 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.2□□□□□ -1.42
PDGFBP01127 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.2□□□□□ -1.42
PDGFBP01127 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.2□□□□□ -1.42
PDGFBP01127 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.2□□□□□ -1.42
PDGFBP01127 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.2□□□□□ -1.42
PDGFBP01127 FKBP1AP1-201ENST00000594588 318 ntBASIC6.2□□□□□ -1.42
PDGFBP01127 AL359513.1-201ENST00000614364 557 ntBASIC6.2□□□□□ -1.42
PDGFBP01127 MIR6810-201ENST00000622701 70 ntBASIC6.2□□□□□ -1.42
PDGFBP01127 AL450226.2-201ENST00000622913 439 ntBASIC6.2□□□□□ -1.42
PDGFBP01127 AP003072.5-201ENST00000623872 773 ntBASIC6.2□□□□□ -1.42
PDGFBP01127 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFBP01127 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFBP01127 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFBP01127 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PDGFBP01127 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFBP01127 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFBP01127 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.2□□□□□ -1.42
PDGFBP01127 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
PDGFBP01127 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.2□□□□□ -1.42
PDGFBP01127 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.2□□□□□ -1.42
PDGFBP01127 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFBP01127 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFBP01127 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.2□□□□□ -1.42
PDGFBP01127 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFBP01127 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.2□□□□□ -1.42
PDGFBP01127 NEK2P2-201ENST00000438441 1338 ntBASIC6.2□□□□□ -1.42
PDGFBP01127 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFBP01127 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFBP01127 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFBP01127 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.2□□□□□ -1.42
PDGFBP01127 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
PDGFBP01127 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.19□□□□□ -1.42
PDGFBP01127 LINC02019-201ENST00000608605 2060 ntBASIC6.19□□□□□ -1.42
PDGFBP01127 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFBP01127 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
PDGFBP01127 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
PDGFBP01127 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFBP01127 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.19□□□□□ -1.42
PDGFBP01127 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFBP01127 MIR199B-201ENST00000384849 110 ntBASIC6.19□□□□□ -1.42
PDGFBP01127 DUTP4-201ENST00000424782 475 ntBASIC6.19□□□□□ -1.42
PDGFBP01127 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.19□□□□□ -1.42
PDGFBP01127 AC126120.1-201ENST00000431082 470 ntBASIC6.19□□□□□ -1.42
PDGFBP01127 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.19□□□□□ -1.42
PDGFBP01127 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.19□□□□□ -1.42
PDGFBP01127 AL645937.3-201ENST00000453647 936 ntBASIC6.19□□□□□ -1.42
PDGFBP01127 CBX1P2-201ENST00000453841 458 ntBASIC6.19□□□□□ -1.42
PDGFBP01127 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFBP01127 AC004453.1-201ENST00000487895 408 ntBASIC6.19□□□□□ -1.42
PDGFBP01127 HIGD1AP14-201ENST00000507617 282 ntBASIC6.19□□□□□ -1.42
PDGFBP01127 AC010343.2-201ENST00000510162 224 ntBASIC6.19□□□□□ -1.42
PDGFBP01127 AC106800.3-201ENST00000511389 308 ntBASIC6.19□□□□□ -1.42
PDGFBP01127 SNORA43.3-201ENST00000517240 103 ntBASIC6.19□□□□□ -1.42
PDGFBP01127 IGKV1D-22-201ENST00000518953 324 ntBASIC6.19□□□□□ -1.42
PDGFBP01127 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.19□□□□□ -1.42
PDGFBP01127 OR9L1P-201ENST00000529493 933 ntBASIC6.19□□□□□ -1.42
PDGFBP01127 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.19□□□□□ -1.42
PDGFBP01127 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
PDGFBP01127 AL021918.2-201ENST00000613415 194 ntBASIC6.19□□□□□ -1.42
PDGFBP01127 RPSAP73-201ENST00000614820 330 ntBASIC6.19□□□□□ -1.42
PDGFBP01127 AL445649.1-201ENST00000615941 691 ntBASIC6.19□□□□□ -1.42
PDGFBP01127 AC012653.2-201ENST00000621880 420 ntBASIC6.19□□□□□ -1.42
PDGFBP01127 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.19□□□□□ -1.42
PDGFBP01127 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFBP01127 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFBP01127 AL662795.2-201ENST00000624252 3706 ntBASIC6.19□□□□□ -1.42
PDGFBP01127 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFBP01127 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PDGFBP01127 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFBP01127 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.18□□□□□ -1.42
PDGFBP01127 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFBP01127 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.18□□□□□ -1.42
PDGFBP01127 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.18□□□□□ -1.42
PDGFBP01127 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 266.9 ms