Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 AP001052.1-201ENST00000626421 99 ntBASIC6.58□□□□□ -1.36
UBE4BO95155 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.58□□□□□ -1.36
UBE4BO95155 AC130304.1-201ENST00000622942 2385 ntBASIC6.58□□□□□ -1.36
UBE4BO95155 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
UBE4BO95155 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
UBE4BO95155 SNX18P3-202ENST00000565670 1750 ntBASIC6.58□□□□□ -1.36
UBE4BO95155 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
UBE4BO95155 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
UBE4BO95155 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
UBE4BO95155 AC093225.1-201ENST00000506867 1408 ntBASIC6.58□□□□□ -1.36
UBE4BO95155 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
UBE4BO95155 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.58□□□□□ -1.36
UBE4BO95155 AL354854.1-201ENST00000455940 1363 ntBASIC6.58□□□□□ -1.36
UBE4BO95155 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
UBE4BO95155 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.58□□□□□ -1.36
UBE4BO95155 AC005224.3-201ENST00000584683 2140 ntBASIC6.58□□□□□ -1.36
UBE4BO95155 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
UBE4BO95155 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
UBE4BO95155 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.57□□□□□ -1.36
UBE4BO95155 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
UBE4BO95155 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.57□□□□□ -1.36
UBE4BO95155 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
UBE4BO95155 QRSL1P1-201ENST00000400977 1540 ntBASIC6.57□□□□□ -1.36
UBE4BO95155 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
UBE4BO95155 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
UBE4BO95155 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.57□□□□□ -1.36
UBE4BO95155 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.57□□□□□ -1.36
UBE4BO95155 RPL35AP3-201ENST00000414680 288 ntBASIC6.57□□□□□ -1.36
UBE4BO95155 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.57□□□□□ -1.36
UBE4BO95155 KIF4CP-201ENST00000422742 1279 ntBASIC6.57□□□□□ -1.36
UBE4BO95155 AC245884.2-201ENST00000426257 404 ntBASIC6.57□□□□□ -1.36
UBE4BO95155 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.57□□□□□ -1.36
UBE4BO95155 AC242426.1-201ENST00000435270 960 ntBASIC6.57□□□□□ -1.36
UBE4BO95155 AL445928.1-201ENST00000435545 222 ntBASIC6.57□□□□□ -1.36
UBE4BO95155 CFL1P4-201ENST00000451536 498 ntBASIC6.57□□□□□ -1.36
UBE4BO95155 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.57□□□□□ -1.36
UBE4BO95155 RN7SKP288-201ENST00000516227 268 ntBASIC6.57□□□□□ -1.36
UBE4BO95155 SNORA81.2-201ENST00000516868 170 ntBASIC6.57□□□□□ -1.36
UBE4BO95155 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.57□□□□□ -1.36
UBE4BO95155 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.57□□□□□ -1.36
UBE4BO95155 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.57□□□□□ -1.36
UBE4BO95155 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.57□□□□□ -1.36
UBE4BO95155 AL845552.1-201ENST00000556820 323 ntBASIC6.57□□□□□ -1.36
UBE4BO95155 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.57□□□□□ -1.36
UBE4BO95155 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.57□□□□□ -1.36
UBE4BO95155 AL139041.1-201ENST00000605480 610 ntBASIC6.57□□□□□ -1.36
UBE4BO95155 AP001437.1-201ENST00000608783 456 ntBASIC6.57□□□□□ -1.36
UBE4BO95155 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
UBE4BO95155 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
UBE4BO95155 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
UBE4BO95155 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
UBE4BO95155 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.57□□□□□ -1.36
UBE4BO95155 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
UBE4BO95155 RBPJP7-201ENST00000442803 1447 ntBASIC6.57□□□□□ -1.36
UBE4BO95155 RBPJP5-201ENST00000449433 1447 ntBASIC6.57□□□□□ -1.36
UBE4BO95155 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
UBE4BO95155 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.57□□□□□ -1.36
UBE4BO95155 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
UBE4BO95155 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
UBE4BO95155 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
UBE4BO95155 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
UBE4BO95155 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
UBE4BO95155 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
UBE4BO95155 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
UBE4BO95155 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
UBE4BO95155 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.57□□□□□ -1.36
UBE4BO95155 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
UBE4BO95155 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
UBE4BO95155 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
UBE4BO95155 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.56□□□□□ -1.36
UBE4BO95155 AC104966.1-201ENST00000467010 1464 ntBASIC6.56□□□□□ -1.36
UBE4BO95155 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
UBE4BO95155 RNA5SP122-201ENST00000384457 108 ntBASIC6.56□□□□□ -1.36
UBE4BO95155 MIR130B-202ENST00000385018 82 ntBASIC6.56□□□□□ -1.36
UBE4BO95155 MIR1282-201ENST00000408865 101 ntBASIC6.56□□□□□ -1.36
UBE4BO95155 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.56□□□□□ -1.36
UBE4BO95155 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.56□□□□□ -1.36
UBE4BO95155 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.56□□□□□ -1.36
UBE4BO95155 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
UBE4BO95155 H3F3BP1-201ENST00000440551 403 ntBASIC6.56□□□□□ -1.36
UBE4BO95155 RPSAP40-201ENST00000442343 891 ntBASIC6.56□□□□□ -1.36
UBE4BO95155 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
UBE4BO95155 AC005077.1-201ENST00000449226 375 ntBASIC6.56□□□□□ -1.36
UBE4BO95155 GEMIN2P1-201ENST00000454246 752 ntBASIC6.56□□□□□ -1.36
UBE4BO95155 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.56□□□□□ -1.36
UBE4BO95155 AC115223.1-201ENST00000466377 870 ntBASIC6.56□□□□□ -1.36
UBE4BO95155 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
UBE4BO95155 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.56□□□□□ -1.36
UBE4BO95155 AC084121.1-201ENST00000533882 835 ntBASIC6.56□□□□□ -1.36
UBE4BO95155 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.56□□□□□ -1.36
UBE4BO95155 AP005119.1-201ENST00000580956 292 ntBASIC6.56□□□□□ -1.36
UBE4BO95155 AL136131.3-201ENST00000607600 188 ntBASIC6.56□□□□□ -1.36
UBE4BO95155 AC097641.3-201ENST00000613523 464 ntBASIC6.56□□□□□ -1.36
UBE4BO95155 AL445670.1-201ENST00000618889 801 ntBASIC6.56□□□□□ -1.36
UBE4BO95155 MAPK10-350ENST00000641777 965 ntBASIC6.56□□□□□ -1.36
UBE4BO95155 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
UBE4BO95155 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
UBE4BO95155 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
UBE4BO95155 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.56□□□□□ -1.36
UBE4BO95155 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms