Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 MRPS5P3-201ENST00000515577 166 ntBASIC5.96□□□□□ -1.46
SHOX2O60902 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.96□□□□□ -1.46
SHOX2O60902 IGHVII-49-1-201ENST00000521760 224 ntBASIC5.96□□□□□ -1.46
SHOX2O60902 OR4A17P-201ENST00000526032 904 ntBASIC5.96□□□□□ -1.46
SHOX2O60902 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.96□□□□□ -1.46
SHOX2O60902 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.96□□□□□ -1.46
SHOX2O60902 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.96□□□□□ -1.46
SHOX2O60902 AC106730.2-201ENST00000566641 540 ntBASIC5.96□□□□□ -1.46
SHOX2O60902 AC126323.4-201ENST00000566935 234 ntBASIC5.96□□□□□ -1.46
SHOX2O60902 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC5.96□□□□□ -1.46
SHOX2O60902 PPIAP14-201ENST00000577627 496 ntBASIC5.96□□□□□ -1.46
SHOX2O60902 RN7SL426P-201ENST00000579106 295 ntBASIC5.96□□□□□ -1.46
SHOX2O60902 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SHOX2O60902 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SHOX2O60902 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.96□□□□□ -1.46
SHOX2O60902 AC024085.1-201ENST00000604299 432 ntBASIC5.96□□□□□ -1.46
SHOX2O60902 AC008555.7-201ENST00000605008 583 ntBASIC5.96□□□□□ -1.46
SHOX2O60902 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.96□□□□□ -1.46
SHOX2O60902 AC005899.6-201ENST00000620729 297 ntBASIC5.96□□□□□ -1.46
SHOX2O60902 AC091059.2-201ENST00000623355 614 ntBASIC5.96□□□□□ -1.46
SHOX2O60902 AC073488.6-201ENST00000632293 754 ntBASIC5.96□□□□□ -1.46
SHOX2O60902 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.96□□□□□ -1.46
SHOX2O60902 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHOX2O60902 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHOX2O60902 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHOX2O60902 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
SHOX2O60902 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.96□□□□□ -1.46
SHOX2O60902 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHOX2O60902 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHOX2O60902 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
SHOX2O60902 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
SHOX2O60902 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHOX2O60902 AC010401.2-201ENST00000575137 4934 ntBASIC5.95□□□□□ -1.46
SHOX2O60902 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
SHOX2O60902 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHOX2O60902 RNU1-49P-201ENST00000363468 159 ntBASIC5.95□□□□□ -1.46
SHOX2O60902 AC092642.1-201ENST00000392417 425 ntBASIC5.95□□□□□ -1.46
SHOX2O60902 RANP6-201ENST00000413691 644 ntBASIC5.95□□□□□ -1.46
SHOX2O60902 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.95□□□□□ -1.46
SHOX2O60902 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.95□□□□□ -1.46
SHOX2O60902 RNGTTP1-201ENST00000420965 728 ntBASIC5.95□□□□□ -1.46
SHOX2O60902 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.95□□□□□ -1.46
SHOX2O60902 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.95□□□□□ -1.46
SHOX2O60902 AL020997.1-201ENST00000446554 349 ntBASIC5.95□□□□□ -1.46
SHOX2O60902 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.95□□□□□ -1.46
SHOX2O60902 AC099670.1-201ENST00000455141 783 ntBASIC5.95□□□□□ -1.46
SHOX2O60902 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.95□□□□□ -1.46
SHOX2O60902 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.95□□□□□ -1.46
SHOX2O60902 RN7SL643P-201ENST00000471845 291 ntBASIC5.95□□□□□ -1.46
SHOX2O60902 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.95□□□□□ -1.46
SHOX2O60902 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.95□□□□□ -1.46
SHOX2O60902 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.95□□□□□ -1.46
SHOX2O60902 RPL7L1P7-201ENST00000509986 724 ntBASIC5.95□□□□□ -1.46
SHOX2O60902 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.95□□□□□ -1.46
SHOX2O60902 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.95□□□□□ -1.46
SHOX2O60902 OR7E158P-201ENST00000524483 910 ntBASIC5.95□□□□□ -1.46
SHOX2O60902 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC5.95□□□□□ -1.46
SHOX2O60902 AC068993.1-201ENST00000546724 589 ntBASIC5.95□□□□□ -1.46
SHOX2O60902 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.95□□□□□ -1.46
SHOX2O60902 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.95□□□□□ -1.46
SHOX2O60902 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHOX2O60902 AC027243.2-201ENST00000602530 724 ntBASIC5.95□□□□□ -1.46
SHOX2O60902 AC010998.3-201ENST00000613871 631 ntBASIC5.95□□□□□ -1.46
SHOX2O60902 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHOX2O60902 HTR1DP1-201ENST00000616500 888 ntBASIC5.95□□□□□ -1.46
SHOX2O60902 RAB28P4-201ENST00000622233 665 ntBASIC5.95□□□□□ -1.46
SHOX2O60902 AC127071.2-201ENST00000623293 527 ntBASIC5.95□□□□□ -1.46
SHOX2O60902 FRG1EP-201ENST00000634469 770 ntBASIC5.95□□□□□ -1.46
SHOX2O60902 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SHOX2O60902 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SHOX2O60902 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHOX2O60902 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHOX2O60902 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHOX2O60902 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.95□□□□□ -1.46
SHOX2O60902 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.95□□□□□ -1.46
SHOX2O60902 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SHOX2O60902 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHOX2O60902 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.94□□□□□ -1.46
SHOX2O60902 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
SHOX2O60902 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SHOX2O60902 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHOX2O60902 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHOX2O60902 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHOX2O60902 AC005702.3-201ENST00000585345 1447 ntBASIC5.94□□□□□ -1.46
SHOX2O60902 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.94□□□□□ -1.46
SHOX2O60902 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHOX2O60902 RN7SKP78-201ENST00000364711 318 ntBASIC5.94□□□□□ -1.46
SHOX2O60902 MIR188-201ENST00000385034 86 ntBASIC5.94□□□□□ -1.46
SHOX2O60902 AL034417.1-201ENST00000399343 800 ntBASIC5.94□□□□□ -1.46
SHOX2O60902 RPL12P23-201ENST00000405880 490 ntBASIC5.94□□□□□ -1.46
SHOX2O60902 RN7SKP121-201ENST00000410842 305 ntBASIC5.94□□□□□ -1.46
SHOX2O60902 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.94□□□□□ -1.46
SHOX2O60902 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.94□□□□□ -1.46
SHOX2O60902 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.94□□□□□ -1.46
SHOX2O60902 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.94□□□□□ -1.46
SHOX2O60902 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.94□□□□□ -1.46
SHOX2O60902 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.94□□□□□ -1.46
SHOX2O60902 AC016724.1-201ENST00000453215 421 ntBASIC5.94□□□□□ -1.46
SHOX2O60902 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.94□□□□□ -1.46
SHOX2O60902 RPS10P28-201ENST00000480396 498 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms