Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HCN1O60741 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HCN1O60741 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HCN1O60741 AC123769.1-201ENST00000530992 3192 ntBASIC5.73□□□□□ -1.49
HCN1O60741 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HCN1O60741 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
HCN1O60741 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HCN1O60741 RN7SKP144-201ENST00000411108 279 ntBASIC5.73□□□□□ -1.49
HCN1O60741 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.73□□□□□ -1.49
HCN1O60741 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.73□□□□□ -1.49
HCN1O60741 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.73□□□□□ -1.49
HCN1O60741 AL354707.3-201ENST00000427308 331 ntBASIC5.73□□□□□ -1.49
HCN1O60741 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.73□□□□□ -1.49
HCN1O60741 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.73□□□□□ -1.49
HCN1O60741 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.73□□□□□ -1.49
HCN1O60741 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.73□□□□□ -1.49
HCN1O60741 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.73□□□□□ -1.49
HCN1O60741 RPL12P30-201ENST00000488389 499 ntBASIC5.73□□□□□ -1.49
HCN1O60741 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.73□□□□□ -1.49
HCN1O60741 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.73□□□□□ -1.49
HCN1O60741 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.73□□□□□ -1.49
HCN1O60741 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.73□□□□□ -1.49
HCN1O60741 AC090888.3-201ENST00000558917 509 ntBASIC5.73□□□□□ -1.49
HCN1O60741 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.73□□□□□ -1.49
HCN1O60741 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HCN1O60741 MIR3189-201ENST00000578735 73 ntBASIC5.73□□□□□ -1.49
HCN1O60741 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.73□□□□□ -1.49
HCN1O60741 AC005332.4-201ENST00000592752 579 ntBASIC5.73□□□□□ -1.49
HCN1O60741 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.73□□□□□ -1.49
HCN1O60741 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HCN1O60741 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
HCN1O60741 AC025262.3-201ENST00000623666 360 ntBASIC5.73□□□□□ -1.49
HCN1O60741 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.73□□□□□ -1.49
HCN1O60741 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.73□□□□□ -1.49
HCN1O60741 MIR1910-201ENST00000636955 80 ntBASIC5.73□□□□□ -1.49
HCN1O60741 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.73□□□□□ -1.49
HCN1O60741 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HCN1O60741 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HCN1O60741 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HCN1O60741 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HCN1O60741 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
HCN1O60741 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
HCN1O60741 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HCN1O60741 ICE2P1-201ENST00000512800 1849 ntBASIC5.73□□□□□ -1.49
HCN1O60741 AL442128.2-201ENST00000620246 1824 ntBASIC5.73□□□□□ -1.49
HCN1O60741 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HCN1O60741 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HCN1O60741 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.73□□□□□ -1.49
HCN1O60741 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HCN1O60741 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HCN1O60741 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HCN1O60741 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HCN1O60741 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
HCN1O60741 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HCN1O60741 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HCN1O60741 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HCN1O60741 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.72□□□□□ -1.49
HCN1O60741 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HCN1O60741 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HCN1O60741 MIR1282-201ENST00000408865 101 ntBASIC5.72□□□□□ -1.49
HCN1O60741 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.72□□□□□ -1.49
HCN1O60741 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.72□□□□□ -1.49
HCN1O60741 RPL12P11-201ENST00000439970 501 ntBASIC5.72□□□□□ -1.49
HCN1O60741 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.72□□□□□ -1.49
HCN1O60741 RPS10P18-201ENST00000442662 495 ntBASIC5.72□□□□□ -1.49
HCN1O60741 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.72□□□□□ -1.49
HCN1O60741 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.72□□□□□ -1.49
HCN1O60741 RPS27AP3-201ENST00000453803 454 ntBASIC5.72□□□□□ -1.49
HCN1O60741 Z83838.1-202ENST00000456225 839 ntBASIC5.72□□□□□ -1.49
HCN1O60741 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HCN1O60741 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.72□□□□□ -1.49
HCN1O60741 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.72□□□□□ -1.49
HCN1O60741 AC009879.1-201ENST00000520029 839 ntBASIC5.72□□□□□ -1.49
HCN1O60741 AC005363.1-201ENST00000530779 351 ntBASIC5.72□□□□□ -1.49
HCN1O60741 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.72□□□□□ -1.49
HCN1O60741 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.72□□□□□ -1.49
HCN1O60741 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.72□□□□□ -1.49
HCN1O60741 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HCN1O60741 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.72□□□□□ -1.49
HCN1O60741 NPM1P5-201ENST00000557228 838 ntBASIC5.72□□□□□ -1.49
HCN1O60741 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.72□□□□□ -1.49
HCN1O60741 RN7SL475P-201ENST00000583379 298 ntBASIC5.72□□□□□ -1.49
HCN1O60741 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.72□□□□□ -1.49
HCN1O60741 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.72□□□□□ -1.49
HCN1O60741 AC107993.1-201ENST00000591343 684 ntBASIC5.72□□□□□ -1.49
HCN1O60741 AP001437.1-201ENST00000608783 456 ntBASIC5.72□□□□□ -1.49
HCN1O60741 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.72□□□□□ -1.49
HCN1O60741 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.72□□□□□ -1.49
HCN1O60741 MIR7159-201ENST00000620587 66 ntBASIC5.72□□□□□ -1.49
HCN1O60741 AC018628.1-201ENST00000624147 3819 ntBASIC5.72□□□□□ -1.49
HCN1O60741 AC073488.6-201ENST00000632293 754 ntBASIC5.72□□□□□ -1.49
HCN1O60741 HSPD1P9-201ENST00000420325 1636 ntBASIC5.72□□□□□ -1.49
HCN1O60741 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HCN1O60741 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HCN1O60741 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.72□□□□□ -1.49
HCN1O60741 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HCN1O60741 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HCN1O60741 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.72□□□□□ -1.49
HCN1O60741 QRSL1P1-201ENST00000400977 1540 ntBASIC5.72□□□□□ -1.49
HCN1O60741 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms