Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
SOX1O00570 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SOX1O00570 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC7.54□□□□□ -1.2
SOX1O00570 SGO1P2-201ENST00000429458 1589 ntBASIC7.54□□□□□ -1.2
SOX1O00570 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SOX1O00570 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SOX1O00570 AL132640.2-201ENST00000559968 1698 ntBASIC7.54□□□□□ -1.2
SOX1O00570 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SOX1O00570 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SOX1O00570 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
SOX1O00570 ANKRD20A17P-201ENST00000511745 1330 ntBASIC7.53□□□□□ -1.2
SOX1O00570 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.2
SOX1O00570 IST1-208ENST00000535424 4082 ntTSL 5 BASIC7.53□□□□□ -1.2
SOX1O00570 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.53□□□□□ -1.2
SOX1O00570 AL358913.2-201ENST00000553881 1548 ntBASIC7.53□□□□□ -1.2
SOX1O00570 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC7.53□□□□□ -1.2
SOX1O00570 MS4A10-201ENST00000308287 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SOX1O00570 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SOX1O00570 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SOX1O00570 AC012020.1-201ENST00000624541 1728 ntBASIC7.53□□□□□ -1.2
SOX1O00570 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.53□□□□□ -1.2
SOX1O00570 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
SOX1O00570 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SOX1O00570 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SOX1O00570 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SOX1O00570 RPS7-204ENST00000407445 833 ntTSL 2 BASIC7.53□□□□□ -1.2
SOX1O00570 GLS-204ENST00000409428 816 ntTSL 2 BASIC7.53□□□□□ -1.2
SOX1O00570 FIGN-202ENST00000409634 746 ntTSL 5 BASIC7.53□□□□□ -1.2
SOX1O00570 RN7SKP286-201ENST00000410894 299 ntBASIC7.53□□□□□ -1.2
SOX1O00570 RN7SKP207-201ENST00000411204 303 ntBASIC7.53□□□□□ -1.2
SOX1O00570 AC092638.1-201ENST00000411966 1275 ntBASIC7.53□□□□□ -1.2
SOX1O00570 AC016831.2-201ENST00000417179 352 ntBASIC7.53□□□□□ -1.2
SOX1O00570 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.53□□□□□ -1.2
SOX1O00570 AC066692.1-201ENST00000421721 457 ntBASIC7.53□□□□□ -1.2
SOX1O00570 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC7.53□□□□□ -1.2
SOX1O00570 HIGD1AP12-201ENST00000427832 281 ntBASIC7.53□□□□□ -1.2
SOX1O00570 RPSAP65-201ENST00000429660 595 ntBASIC7.53□□□□□ -1.2
SOX1O00570 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC7.53□□□□□ -1.2
SOX1O00570 MTND1P32-201ENST00000433043 938 ntBASIC7.53□□□□□ -1.2
SOX1O00570 MYL6P3-201ENST00000436904 432 ntBASIC7.53□□□□□ -1.2
SOX1O00570 COL11A2P1-205ENST00000441798 676 ntBASIC7.53□□□□□ -1.2
SOX1O00570 RPL5P7-201ENST00000444235 813 ntBASIC7.53□□□□□ -1.2
SOX1O00570 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC7.53□□□□□ -1.2
SOX1O00570 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.53□□□□□ -1.2
SOX1O00570 RPL7P32-201ENST00000457119 744 ntBASIC7.53□□□□□ -1.2
SOX1O00570 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC7.53□□□□□ -1.2
SOX1O00570 NXT1P1-201ENST00000458481 316 ntBASIC7.53□□□□□ -1.2
SOX1O00570 RN7SL860P-201ENST00000473738 223 ntBASIC7.53□□□□□ -1.2
SOX1O00570 SUMO1P1-201ENST00000497904 306 ntBASIC7.53□□□□□ -1.2
SOX1O00570 AC021087.2-201ENST00000504656 1203 ntBASIC7.53□□□□□ -1.2
SOX1O00570 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SOX1O00570 AC008885.2-201ENST00000509506 930 ntBASIC7.53□□□□□ -1.2
SOX1O00570 RPL7L1P4-201ENST00000513004 707 ntBASIC7.53□□□□□ -1.2
SOX1O00570 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.53□□□□□ -1.2
SOX1O00570 IGKV2-19-201ENST00000518132 283 ntBASIC7.53□□□□□ -1.2
SOX1O00570 C1GALT1P3-201ENST00000522049 819 ntBASIC7.53□□□□□ -1.2
SOX1O00570 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC7.53□□□□□ -1.2
SOX1O00570 OR4C7P-201ENST00000533375 919 ntBASIC7.53□□□□□ -1.2
SOX1O00570 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC7.53□□□□□ -1.2
SOX1O00570 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC7.53□□□□□ -1.2
SOX1O00570 AL121766.1-201ENST00000547436 487 ntBASIC7.53□□□□□ -1.2
SOX1O00570 AC008147.3-201ENST00000548666 354 ntBASIC7.53□□□□□ -1.2
SOX1O00570 CCNG2P1-201ENST00000549521 1000 ntBASIC7.53□□□□□ -1.2
SOX1O00570 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC7.53□□□□□ -1.2
SOX1O00570 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.53□□□□□ -1.2
SOX1O00570 AC087481.2-201ENST00000565492 330 ntBASIC7.53□□□□□ -1.2
SOX1O00570 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC7.53□□□□□ -1.2
SOX1O00570 MIR3680-2-201ENST00000578247 87 ntBASIC7.53□□□□□ -1.2
SOX1O00570 MIR3680-1-201ENST00000581433 87 ntBASIC7.53□□□□□ -1.2
SOX1O00570 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC7.53□□□□□ -1.2
SOX1O00570 PRELID3BP3-201ENST00000584963 545 ntBASIC7.53□□□□□ -1.2
SOX1O00570 VN1R90P-201ENST00000595717 726 ntBASIC7.53□□□□□ -1.2
SOX1O00570 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC7.53□□□□□ -1.2
SOX1O00570 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.53□□□□□ -1.2
SOX1O00570 AC093635.1-201ENST00000609028 555 ntBASIC7.53□□□□□ -1.2
SOX1O00570 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.53□□□□□ -1.2
SOX1O00570 AC069234.4-201ENST00000621276 412 ntBASIC7.53□□□□□ -1.2
SOX1O00570 AF246928.1-201ENST00000623768 87 ntBASIC7.53□□□□□ -1.2
SOX1O00570 AC061999.1-201ENST00000624454 177 ntBASIC7.53□□□□□ -1.2
SOX1O00570 SNX18P10-201ENST00000625014 519 ntBASIC7.53□□□□□ -1.2
SOX1O00570 ZNF663P-202ENST00000641770 1131 ntBASIC7.53□□□□□ -1.2
SOX1O00570 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC7.53□□□□□ -1.2
SOX1O00570 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.53□□□□□ -1.2
SOX1O00570 ATP5BP1-201ENST00000411980 1574 ntBASIC7.53□□□□□ -1.2
SOX1O00570 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SOX1O00570 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SOX1O00570 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
SOX1O00570 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SOX1O00570 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SOX1O00570 APEX2-201ENST00000374987 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SOX1O00570 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC7.53□□□□□ -1.2
SOX1O00570 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
SOX1O00570 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SOX1O00570 FAM13C-215ENST00000614220 3388 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
SOX1O00570 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
SOX1O00570 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
SOX1O00570 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.52□□□□□ -1.2
SOX1O00570 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.2
SOX1O00570 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.52□□□□□ -1.2
SOX1O00570 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.52□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms