Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC114774.1-201ENST00000507410 1770 ntBASIC5.04□□□□□ -1.6
SDCBPO00560 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SDCBPO00560 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.03□□□□□ -1.6
SDCBPO00560 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
SDCBPO00560 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
SDCBPO00560 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SDCBPO00560 THAP12P9-201ENST00000503971 2360 ntBASIC5.03□□□□□ -1.6
SDCBPO00560 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 MIR191-201ENST00000384873 92 ntBASIC5.03□□□□□ -1.6
SDCBPO00560 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.03□□□□□ -1.6
SDCBPO00560 Z82198.3-201ENST00000421145 199 ntBASIC5.03□□□□□ -1.6
SDCBPO00560 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC5.03□□□□□ -1.6
SDCBPO00560 ARMC4P1-201ENST00000438905 707 ntBASIC5.03□□□□□ -1.6
SDCBPO00560 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.03□□□□□ -1.6
SDCBPO00560 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 RPSAP40-201ENST00000442343 891 ntBASIC5.03□□□□□ -1.6
SDCBPO00560 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.03□□□□□ -1.6
SDCBPO00560 RN7SL552P-201ENST00000462094 276 ntBASIC5.03□□□□□ -1.6
SDCBPO00560 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 NACAP5-201ENST00000509863 636 ntBASIC5.03□□□□□ -1.6
SDCBPO00560 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.03□□□□□ -1.6
SDCBPO00560 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.03□□□□□ -1.6
SDCBPO00560 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC5.03□□□□□ -1.6
SDCBPO00560 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.03□□□□□ -1.6
SDCBPO00560 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.03□□□□□ -1.6
SDCBPO00560 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 MT1CP-201ENST00000567054 174 ntBASIC5.03□□□□□ -1.6
SDCBPO00560 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.03□□□□□ -1.6
SDCBPO00560 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.03□□□□□ -1.6
SDCBPO00560 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.03□□□□□ -1.6
SDCBPO00560 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.03□□□□□ -1.6
SDCBPO00560 AC005479.3-201ENST00000602790 431 ntBASIC5.03□□□□□ -1.6
SDCBPO00560 WBP1LP12-201ENST00000604449 331 ntBASIC5.03□□□□□ -1.6
SDCBPO00560 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.03□□□□□ -1.6
SDCBPO00560 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
SDCBPO00560 MIR6823-201ENST00000622118 61 ntBASIC5.03□□□□□ -1.6
SDCBPO00560 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.03□□□□□ -1.6
SDCBPO00560 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.03□□□□□ -1.6
SDCBPO00560 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.03□□□□□ -1.6
SDCBPO00560 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.03□□□□□ -1.6
SDCBPO00560 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 SAMM50P1-201ENST00000455403 1399 ntBASIC5.03□□□□□ -1.6
SDCBPO00560 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SDCBPO00560 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SDCBPO00560 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SDCBPO00560 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SDCBPO00560 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SDCBPO00560 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
SDCBPO00560 AL592429.1-201ENST00000403909 1473 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SDCBPO00560 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SDCBPO00560 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SDCBPO00560 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.02□□□□□ -1.61
SDCBPO00560 OR10R3P-201ENST00000361688 942 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 RNA5SP453-201ENST00000362503 119 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
SDCBPO00560 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SDCBPO00560 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.02□□□□□ -1.61
SDCBPO00560 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SDCBPO00560 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.02□□□□□ -1.61
SDCBPO00560 RN7SKP146-201ENST00000410242 334 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 MYL6P5-201ENST00000412707 459 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 METTL15P3-201ENST00000415522 1221 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.02□□□□□ -1.61
SDCBPO00560 AC097359.1-201ENST00000447946 463 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.02□□□□□ -1.61
SDCBPO00560 RSU1P1-201ENST00000453416 441 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 AC079080.1-201ENST00000479841 822 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 RPL29P23-201ENST00000486188 442 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 RPL12P30-201ENST00000488389 499 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 AP002453.1-201ENST00000492327 668 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SDCBPO00560 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.02□□□□□ -1.61
SDCBPO00560 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.02□□□□□ -1.61
SDCBPO00560 HMGN1P16-201ENST00000508308 283 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.02□□□□□ -1.61
SDCBPO00560 AC108103.1-201ENST00000511286 446 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.02□□□□□ -1.61
SDCBPO00560 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.02□□□□□ -1.61
SDCBPO00560 AC078899.1-201ENST00000521432 1185 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 OR56A7P-201ENST00000524865 941 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms