Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 RPL12P30-201ENST00000488389 499 ntBASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AC092865.1-201ENST00000544395 1023 ntBASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 OR7E18P-201ENST00000592589 702 ntBASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AL591167.1-201ENST00000607321 456 ntBASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AP001437.1-201ENST00000608783 456 ntBASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AC022106.1-201ENST00000612834 766 ntBASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AP001885.1-201ENST00000621658 558 ntBASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AL391262.2-201ENST00000622466 494 ntBASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AC004836.1-201ENST00000623032 634 ntBASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AC073488.6-201ENST00000632293 754 ntBASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AP001541.1-201ENST00000623322 1904 ntBASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AL137918.1-201ENST00000624542 1922 ntBASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AC073342.2-201ENST00000595842 1800 ntBASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 OR5T3-201ENST00000303059 1023 ntBASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 RN7SKP216-201ENST00000411050 312 ntBASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 SLC20A1P1-201ENST00000413906 956 ntBASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 AC066692.1-201ENST00000421721 457 ntBASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 RPL7AP14-201ENST00000424041 802 ntBASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 AC103563.5-201ENST00000455643 364 ntBASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 HESX1-202ENST00000473921 757 ntTSL 5 BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 RPL34P33-201ENST00000486062 334 ntBASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 RBBP4P1-201ENST00000502424 1276 ntBASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 MTND6P8-201ENST00000503471 522 ntBASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 SNX18P24-201ENST00000505249 671 ntBASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 Y_RNA.710-201ENST00000516975 110 ntBASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 NPIPB1P-202ENST00000588786 828 ntBASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 SDR42E1P1-201ENST00000611327 477 ntBASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 AL391597.1-201ENST00000618707 694 ntBASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 MIR6719-201ENST00000622428 87 ntBASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RAI2Q9Y5P3 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RAI2Q9Y5P3 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RAI2Q9Y5P3 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RAI2Q9Y5P3 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RAI2Q9Y5P3 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RAI2Q9Y5P3 EIF3EP1-201ENST00000433978 1316 ntBASIC6.28□□□□□ -1.4
RAI2Q9Y5P3 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RAI2Q9Y5P3 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.28□□□□□ -1.4
RAI2Q9Y5P3 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.28□□□□□ -1.4
RAI2Q9Y5P3 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RAI2Q9Y5P3 AC091305.2-201ENST00000624049 1576 ntBASIC6.28□□□□□ -1.4
RAI2Q9Y5P3 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.28□□□□□ -1.4
RAI2Q9Y5P3 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms