Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 PRMT5P1-201ENST00000514351 598 ntBASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 NANOGNBP2-201ENST00000544753 553 ntBASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 AC008521.2-201ENST00000591021 259 ntBASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 AP003789.1-201ENST00000617737 605 ntBASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 MIR7159-201ENST00000620587 66 ntBASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 AL512356.3-201ENST00000623005 461 ntBASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 FO681491.1-202ENST00000623392 737 ntBASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 LINC01616-201ENST00000561816 2280 ntBASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 SHQ1P1-201ENST00000437111 1544 ntBASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 AC018717.1-201ENST00000457712 1505 ntBASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 AL137141.1-201ENST00000624622 4836 ntBASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 AL133243.2-201ENST00000610331 1621 ntBASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 AC130360.1-201ENST00000425489 1117 ntBASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 AC010343.2-201ENST00000510162 224 ntBASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 RNA5SP340-201ENST00000517132 107 ntBASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 AC130365.2-201ENST00000525882 1201 ntBASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 AC022106.1-201ENST00000612834 766 ntBASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 AC010998.3-201ENST00000613871 631 ntBASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 AL445649.1-201ENST00000615941 691 ntBASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 AC129778.1-202ENST00000623812 261 ntBASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 AL591379.1-207ENST00000635982 261 ntBASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 CASC19-238ENST00000641523 1558 ntBASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
NPIPA1Q9UND3 MAPK10-287ENST00000641217 3037 ntBASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 AC090220.1-201ENST00000593078 1699 ntBASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 RNU1-134P-201ENST00000362935 165 ntBASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 RNA5SP514-201ENST00000363717 111 ntBASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 MIR433-201ENST00000384837 93 ntBASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 LYPLA1P3-201ENST00000402650 695 ntBASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 PPIAP10-201ENST00000438675 458 ntBASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 AC103563.5-201ENST00000455643 364 ntBASIC5.66□□□□□ -1.5
NPIPA1Q9UND3 SETP20-201ENST00000457046 852 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms