Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 uc_338.29-201ENST00000615099 168 ntBASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 AL445670.1-201ENST00000618889 801 ntBASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 MIR6813-201ENST00000621638 56 ntBASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 GNL2P1-201ENST00000451274 2190 ntBASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 AP003486.1-201ENST00000525716 3994 ntBASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 AC239868.2-201ENST00000564237 4527 ntBASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 AL590399.2-201ENST00000427536 309 ntBASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 GAPDHP59-201ENST00000435908 267 ntBASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 AC023141.3-201ENST00000436698 278 ntBASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 RPS7P3-201ENST00000443360 580 ntBASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 AC073476.1-201ENST00000452854 407 ntBASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 AC098818.1-201ENST00000478593 252 ntBASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 AC044810.1-201ENST00000480271 711 ntBASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 RN7SL568P-201ENST00000493069 298 ntBASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 AC106822.1-201ENST00000502647 526 ntBASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 AC112484.3-201ENST00000505910 329 ntBASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 AC007346.1-201ENST00000569208 867 ntBASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 ARGFXP2-201ENST00000579304 949 ntBASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 AC073333.2-201ENST00000603589 769 ntBASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 uc_338.31-201ENST00000615595 186 ntBASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 AC073488.3-201ENST00000631611 778 ntBASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 RBPJP7-201ENST00000442803 1447 ntBASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 RBPJP5-201ENST00000449433 1447 ntBASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 KYNUP3-201ENST00000574386 1341 ntBASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
VPS29Q9UBQ0 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 AP002512.4-202ENST00000641599 4530 ntBASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 AC121334.1-201ENST00000396414 802 ntBASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 AL359885.1-201ENST00000415786 903 ntBASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 FAM183DP-201ENST00000421987 399 ntBASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 AL139158.1-201ENST00000424719 340 ntBASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 RPSAP65-201ENST00000429660 595 ntBASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 AC096632.2-201ENST00000438139 1239 ntBASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 KRT8P51-201ENST00000438938 274 ntBASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 AL353662.1-201ENST00000439099 327 ntBASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 AL663074.2-201ENST00000440621 479 ntBASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 DNAJC19P5-201ENST00000443295 316 ntBASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 AC092865.4-201ENST00000477936 615 ntBASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 AC093719.1-201ENST00000480427 441 ntBASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 AC008629.2-201ENST00000503783 483 ntBASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 AP003033.2-201ENST00000528901 805 ntBASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 AC092332.1-201ENST00000563684 829 ntBASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 AC002519.2-203ENST00000567043 837 ntBASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 AL163952.1-202ENST00000569625 600 ntBASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 SETP3-201ENST00000581726 813 ntBASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 MIR5010-201ENST00000582846 120 ntBASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 AL138960.1-201ENST00000613838 513 ntBASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 TEX41-271ENST00000628213 993 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms