Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 RNA5SP438-201ENST00000516561 112 ntBASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 AC020916.2-201ENST00000591242 360 ntBASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 AC011497.2-201ENST00000600255 639 ntBASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 LINC01616-201ENST00000561816 2280 ntBASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 RBPJP7-201ENST00000442803 1447 ntBASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 RBPJP5-201ENST00000449433 1447 ntBASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 RPL35AP3-201ENST00000414680 288 ntBASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 BX284632.2-201ENST00000421091 399 ntBASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 AC245884.2-201ENST00000426257 404 ntBASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 AL512605.1-202ENST00000441919 381 ntBASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 AL359955.2-201ENST00000445380 353 ntBASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 AOX3P-204ENST00000491025 2107 ntBASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 RNA5SP271-201ENST00000516700 88 ntBASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 OR56A7P-201ENST00000524865 941 ntBASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 OR4H6P-201ENST00000563771 921 ntBASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 AC027243.2-201ENST00000602530 724 ntBASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 AC100767.2-201ENST00000604840 693 ntBASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.4□□□□□ -1.54
CLCF1Q9UBD9 AF287957.1-201ENST00000607368 1595 ntBASIC5.4□□□□□ -1.55
CLCF1Q9UBD9 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLCF1Q9UBD9 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLCF1Q9UBD9 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.4□□□□□ -1.55
CLCF1Q9UBD9 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CLCF1Q9UBD9 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.4□□□□□ -1.55
CLCF1Q9UBD9 CCNT2P1-201ENST00000423082 1315 ntBASIC5.4□□□□□ -1.55
CLCF1Q9UBD9 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
CLCF1Q9UBD9 MAPK10-261ENST00000641050 3109 ntBASIC5.4□□□□□ -1.55
CLCF1Q9UBD9 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLCF1Q9UBD9 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLCF1Q9UBD9 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
CLCF1Q9UBD9 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLCF1Q9UBD9 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
CLCF1Q9UBD9 TTC41P-205ENST00000551270 3963 ntBASIC5.4□□□□□ -1.55
CLCF1Q9UBD9 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 AC012254.3-201ENST00000591183 2117 ntBASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 RNA5SP122-201ENST00000384457 108 ntBASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 NDUFS5P5-201ENST00000437256 321 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms