Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 AC010894.1-201ENST00000313760 361 ntBASIC5.43□□□□□ -1.54
HMG20AQ9NP66 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 AL445238.1-204ENST00000400311 463 ntBASIC5.43□□□□□ -1.54
HMG20AQ9NP66 SNORA77.2-201ENST00000408571 112 ntBASIC5.43□□□□□ -1.54
HMG20AQ9NP66 OR52N3P-201ENST00000413417 934 ntBASIC5.43□□□□□ -1.54
HMG20AQ9NP66 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 AL139184.1-202ENST00000422303 222 ntBASIC5.43□□□□□ -1.54
HMG20AQ9NP66 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 RPS4XP12-201ENST00000461747 709 ntBASIC5.43□□□□□ -1.54
HMG20AQ9NP66 AC124945.1-201ENST00000485133 188 ntBASIC5.43□□□□□ -1.54
HMG20AQ9NP66 RN7SL655P-201ENST00000486087 298 ntBASIC5.43□□□□□ -1.54
HMG20AQ9NP66 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 AL163952.1-202ENST00000569625 600 ntBASIC5.43□□□□□ -1.54
HMG20AQ9NP66 AC023389.2-201ENST00000580031 955 ntBASIC5.43□□□□□ -1.54
HMG20AQ9NP66 RN7SL32P-201ENST00000580514 281 ntBASIC5.43□□□□□ -1.54
HMG20AQ9NP66 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 AC004805.3-201ENST00000603178 310 ntBASIC5.43□□□□□ -1.54
HMG20AQ9NP66 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 MIR6133-201ENST00000617057 108 ntBASIC5.43□□□□□ -1.54
HMG20AQ9NP66 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 SMG1P5-202ENST00000529428 4219 ntBASIC5.43□□□□□ -1.54
HMG20AQ9NP66 SMG1P2-201ENST00000566127 4221 ntBASIC5.43□□□□□ -1.54
HMG20AQ9NP66 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 AC024587.1-201ENST00000505925 2157 ntBASIC5.43□□□□□ -1.54
HMG20AQ9NP66 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HMG20AQ9NP66 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 OR7A2P-201ENST00000304105 930 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 RNA5SP308-201ENST00000362532 115 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 SNORA70.6-201ENST00000383934 134 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 MIR431-201ENST00000385266 114 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 ZNF37CP-201ENST00000406795 241 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 MEAF6P1-201ENST00000416092 327 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 RPSAP65-201ENST00000429660 595 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 MED28P4-201ENST00000433137 572 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 COL11A2P1-205ENST00000441798 676 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 AL020997.1-201ENST00000446554 349 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 NPM1P19-201ENST00000450070 712 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 AC073594.1-201ENST00000462065 364 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 OR9A1P-202ENST00000484361 945 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 AL079303.1-201ENST00000486611 463 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 COX6B1P2-201ENST00000489624 230 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 AC093870.1-201ENST00000506837 213 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 RN7SKP64-201ENST00000517206 328 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 TMEM97P2-201ENST00000517841 403 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 TPM3P3-201ENST00000521343 354 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 SLC25A51P2-201ENST00000535708 889 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 AC023080.1-201ENST00000551663 931 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 OR4C49P-201ENST00000563891 900 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 AC090826.1-203ENST00000569235 490 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 AC090774.2-201ENST00000584708 322 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 AC008507.3-201ENST00000585753 472 ntBASIC5.42□□□□□ -1.54
HMG20AQ9NP66 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.42□□□□□ -1.54
HMG20AQ9NP66 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms