Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC7.24□□□□□ -1.25
UPF2Q9HAU5 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.24□□□□□ -1.25
UPF2Q9HAU5 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC7.24□□□□□ -1.25
UPF2Q9HAU5 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
UPF2Q9HAU5 MIR6503-201ENST00000622884 86 ntBASIC7.24□□□□□ -1.25
UPF2Q9HAU5 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC7.24□□□□□ -1.25
UPF2Q9HAU5 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC7.24□□□□□ -1.25
UPF2Q9HAU5 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
UPF2Q9HAU5 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
UPF2Q9HAU5 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 AL157702.1-201ENST00000398764 426 ntBASIC7.23□□□□□ -1.25
UPF2Q9HAU5 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 AC006509.1-201ENST00000420788 634 ntBASIC7.23□□□□□ -1.25
UPF2Q9HAU5 RPL7AP14-201ENST00000424041 802 ntBASIC7.23□□□□□ -1.25
UPF2Q9HAU5 MRPS21P2-201ENST00000424704 264 ntBASIC7.23□□□□□ -1.25
UPF2Q9HAU5 AC099677.3-201ENST00000427081 395 ntBASIC7.23□□□□□ -1.25
UPF2Q9HAU5 AC094019.1-201ENST00000434678 472 ntBASIC7.23□□□□□ -1.25
UPF2Q9HAU5 AL590399.4-201ENST00000436561 601 ntBASIC7.23□□□□□ -1.25
UPF2Q9HAU5 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 RNU1-88P-201ENST00000459274 128 ntBASIC7.23□□□□□ -1.25
UPF2Q9HAU5 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 AC068408.1-201ENST00000577406 1144 ntBASIC7.23□□□□□ -1.25
UPF2Q9HAU5 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 RN7SL657P-201ENST00000582431 293 ntBASIC7.23□□□□□ -1.25
UPF2Q9HAU5 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 AC036176.3-201ENST00000602456 418 ntBASIC7.23□□□□□ -1.25
UPF2Q9HAU5 AL512413.1-201ENST00000606489 382 ntBASIC7.23□□□□□ -1.25
UPF2Q9HAU5 MIR6849-201ENST00000618543 69 ntBASIC7.23□□□□□ -1.25
UPF2Q9HAU5 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 AC140479.2-201ENST00000421567 3130 ntBASIC7.23□□□□□ -1.25
UPF2Q9HAU5 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC7.23□□□□□ -1.25
UPF2Q9HAU5 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.22□□□□□ -1.25
UPF2Q9HAU5 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
UPF2Q9HAU5 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
UPF2Q9HAU5 MIR133A2-201ENST00000347538 102 ntBASIC7.22□□□□□ -1.25
UPF2Q9HAU5 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.22□□□□□ -1.25
UPF2Q9HAU5 SNORD94-201ENST00000386037 137 ntBASIC7.22□□□□□ -1.25
UPF2Q9HAU5 RN7SKP279-201ENST00000411383 298 ntBASIC7.22□□□□□ -1.25
UPF2Q9HAU5 OR52N3P-201ENST00000413417 934 ntBASIC7.22□□□□□ -1.25
UPF2Q9HAU5 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.22□□□□□ -1.25
UPF2Q9HAU5 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
UPF2Q9HAU5 HNRNPA1P29-201ENST00000426409 879 ntBASIC7.22□□□□□ -1.25
UPF2Q9HAU5 AC242426.1-201ENST00000435270 960 ntBASIC7.22□□□□□ -1.25
UPF2Q9HAU5 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.22□□□□□ -1.25
UPF2Q9HAU5 AC096775.1-201ENST00000437724 448 ntBASIC7.22□□□□□ -1.25
UPF2Q9HAU5 AL663074.2-201ENST00000440621 479 ntBASIC7.22□□□□□ -1.25
UPF2Q9HAU5 AL645936.1-201ENST00000441979 518 ntBASIC7.22□□□□□ -1.25
UPF2Q9HAU5 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.22□□□□□ -1.25
UPF2Q9HAU5 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.22□□□□□ -1.25
UPF2Q9HAU5 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC7.22□□□□□ -1.25
UPF2Q9HAU5 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.22□□□□□ -1.25
UPF2Q9HAU5 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC7.22□□□□□ -1.25
UPF2Q9HAU5 OR7E19P-202ENST00000589942 844 ntBASIC7.22□□□□□ -1.25
UPF2Q9HAU5 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
UPF2Q9HAU5 AL512430.4-201ENST00000603085 613 ntBASIC7.22□□□□□ -1.25
UPF2Q9HAU5 NDUFB9P1-201ENST00000604683 510 ntBASIC7.22□□□□□ -1.25
UPF2Q9HAU5 AC015712.7-201ENST00000615211 635 ntBASIC7.22□□□□□ -1.25
UPF2Q9HAU5 AC096861.1-201ENST00000616652 240 ntBASIC7.22□□□□□ -1.25
UPF2Q9HAU5 AC022400.9-201ENST00000623633 273 ntBASIC7.22□□□□□ -1.25
UPF2Q9HAU5 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.22□□□□□ -1.25
UPF2Q9HAU5 TEX41-271ENST00000628213 993 ntTSL 5 BASIC7.22□□□□□ -1.25
UPF2Q9HAU5 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
UPF2Q9HAU5 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
UPF2Q9HAU5 EIF3EP1-201ENST00000433978 1316 ntBASIC7.22□□□□□ -1.25
UPF2Q9HAU5 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.22□□□□□ -1.25
UPF2Q9HAU5 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
UPF2Q9HAU5 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
UPF2Q9HAU5 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.25
UPF2Q9HAU5 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC7.21□□□□□ -1.25
UPF2Q9HAU5 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
UPF2Q9HAU5 AC018765.1-201ENST00000623357 3446 ntBASIC7.21□□□□□ -1.26
UPF2Q9HAU5 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.21□□□□□ -1.26
UPF2Q9HAU5 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC7.21□□□□□ -1.26
UPF2Q9HAU5 AC022325.1-201ENST00000502748 2199 ntBASIC7.21□□□□□ -1.26
UPF2Q9HAU5 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
UPF2Q9HAU5 YWHAZP4-201ENST00000392459 708 ntBASIC7.21□□□□□ -1.26
UPF2Q9HAU5 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC7.21□□□□□ -1.26
UPF2Q9HAU5 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.21□□□□□ -1.26
UPF2Q9HAU5 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.21□□□□□ -1.26
UPF2Q9HAU5 MTND2P12-201ENST00000417560 1252 ntBASIC7.21□□□□□ -1.26
UPF2Q9HAU5 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC7.21□□□□□ -1.26
UPF2Q9HAU5 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC7.21□□□□□ -1.26
UPF2Q9HAU5 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms