Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 SAMMSON-210ENST00000641260 1308 ntBASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 SNRPEP6-201ENST00000407465 277 ntBASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 AL022324.2-201ENST00000434827 780 ntBASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 RPS12P17-201ENST00000438591 377 ntBASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 AL663074.2-201ENST00000440621 479 ntBASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 RPL12P30-201ENST00000488389 499 ntBASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 ZNF519P4-201ENST00000514008 125 ntBASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 MIR2117-201ENST00000516780 80 ntBASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 AC036111.2-201ENST00000533247 901 ntBASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 HMGN1P26-201ENST00000558737 303 ntBASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 AL512413.1-201ENST00000606489 382 ntBASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 AL133481.2-203ENST00000607558 139 ntBASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 AC005899.7-201ENST00000618199 588 ntBASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 AC007204.1-201ENST00000621794 555 ntBASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 AL357562.1-201ENST00000624911 609 ntBASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 AC099654.15-201ENST00000639802 509 ntBASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 AC114774.1-201ENST00000507410 1770 ntBASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HDHD3Q9BSH5 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 AC232271.1-201ENST00000602455 2715 ntBASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 SNORA21-201ENST00000362423 132 ntBASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 RNA5SP514-201ENST00000363717 111 ntBASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 RN7SKP108-201ENST00000411367 328 ntBASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 METTL15P3-201ENST00000415522 1221 ntBASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 RPL12P12-201ENST00000424633 501 ntBASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 VN1R20P-201ENST00000425215 966 ntBASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 AC099677.3-201ENST00000427081 395 ntBASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 AC242426.1-201ENST00000435270 960 ntBASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 RPSAP41-201ENST00000439695 860 ntBASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 SEPT14P12-201ENST00000442280 560 ntBASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 AC097359.1-201ENST00000447946 463 ntBASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 AL445991.1-201ENST00000450381 475 ntBASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 AC002553.3-201ENST00000453002 341 ntBASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 H3F3AP5-201ENST00000475267 429 ntBASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 AC083795.1-201ENST00000491760 320 ntBASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 CR383658.1-201ENST00000514609 734 ntBASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 AC022400.9-201ENST00000623633 273 ntBASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HDHD3Q9BSH5 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms