Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC125238.2-201ENST00000430003 1440 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AC017035.1-201ENST00000411999 1115 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AC234781.2-201ENST00000426370 994 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 GTF3AP6-201ENST00000432585 986 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 KCTD10P1-201ENST00000434203 625 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 MUPP-201ENST00000438111 566 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AC236972.4-201ENST00000458091 963 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 RN7SL39P-201ENST00000462264 297 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 MTND6P8-201ENST00000503471 522 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AC116917.1-201ENST00000520558 305 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AC027667.1-201ENST00000545814 304 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AC018558.5-201ENST00000565840 952 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AC061975.8-201ENST00000587058 721 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AC063977.7-201ENST00000594454 337 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AP001160.4-201ENST00000596971 382 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AC234772.3-201ENST00000602277 528 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AL953862.2-201ENST00000603089 820 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AL157899.1-201ENST00000604110 936 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AL450336.1-201ENST00000605180 586 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AL513218.1-201ENST00000606527 391 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AC009779.8-202ENST00000607990 932 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AL359091.2-201ENST00000609303 556 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 MIR6811-201ENST00000620409 58 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AC063952.1-203ENST00000634410 658 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 LINC02495-203ENST00000636704 242 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.77□□□□□ -1.32
CDK5RAP1Q96SZ6 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AL049634.1-201ENST00000453770 1720 ntBASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AL023284.3-201ENST00000407767 334 ntBASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 RPL21P50-201ENST00000417698 477 ntBASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AL139415.1-201ENST00000424862 352 ntBASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 RPL12P28-201ENST00000430852 489 ntBASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AC010153.1-201ENST00000432862 727 ntBASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 ELOCP11-201ENST00000436690 332 ntBASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 ELOCP16-201ENST00000444494 332 ntBASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AP000563.1-201ENST00000490865 758 ntBASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AC091965.3-201ENST00000506236 208 ntBASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms