Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 AC005519.1-201ENST00000554490 601 ntBASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 AC245100.7-201ENST00000609678 442 ntBASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 WT1-AS_8.1-201ENST00000615200 275 ntBASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 MIR6886-201ENST00000619864 61 ntBASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 AC053481.2-202ENST00000582394 1500 ntBASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 KARSP1-201ENST00000451871 1752 ntBASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 SNORA51.1-201ENST00000363243 140 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AC233289.1-201ENST00000403700 508 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AL590635.1-201ENST00000406314 586 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AC245047.1-201ENST00000433276 873 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 NMNAT1P2-201ENST00000435192 860 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 MTND4P25-201ENST00000441039 533 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 GAPDHP16-201ENST00000448152 962 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 RPL12P7-201ENST00000493832 494 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AC010374.1-201ENST00000503762 1237 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 MTCYBP37-201ENST00000510642 1133 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 OR5BM1P-201ENST00000512021 366 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 RNU5A-4P-201ENST00000516588 111 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 NXPE2P1-201ENST00000543705 726 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AL356801.1-201ENST00000559320 294 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 NTAN1P1-201ENST00000603150 646 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AC012175.1-201ENST00000603755 531 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 WBP1LP12-201ENST00000604449 331 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AC092354.2-201ENST00000607786 514 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AC022106.1-201ENST00000612834 766 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 uc_338.29-201ENST00000615099 168 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 RPSAP68-201ENST00000625020 438 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AC084782.1-201ENST00000564401 2465 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 AC009948.3-201ENST00000603415 1798 ntBASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
SYNGAP1Q96PV0 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 RNA5SP443-201ENST00000363083 132 ntBASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 UBBP1-201ENST00000392399 473 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms